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Chlorine in PDB 2dww: Crystal Structure of Bromodomain-Containing Protein 4

Protein crystallography data

The structure of Crystal Structure of Bromodomain-Containing Protein 4, PDB code: 2dww was solved by B.Padmanabhan, S.Yokoyama, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 73.891, 57.779, 33.588, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 24.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Bromodomain-Containing Protein 4 (pdb code 2dww). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Bromodomain-Containing Protein 4, PDB code: 2dww:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2dww

Go back to Chlorine Binding Sites List in 2dww
Chlorine binding site 1 out of 2 in the Crystal Structure of Bromodomain-Containing Protein 4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Bromodomain-Containing Protein 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:40.3
occ:1.00
N A:GLY41 2.6 19.3 1.0
CD2 A:HIS43 2.8 14.7 1.0
CA A:GLY41 3.3 24.9 1.0
CD1 A:LEU40 3.5 21.9 1.0
CG A:HIS43 3.6 21.4 1.0
C A:LEU40 3.7 22.1 1.0
NE2 A:HIS43 3.7 28.7 1.0
CA A:LEU40 3.8 22.0 1.0
C A:GLY41 3.9 21.8 1.0
N A:LEU42 4.0 22.0 1.0
CB A:HIS43 4.0 20.2 1.0
N A:HIS43 4.2 21.6 1.0
CG A:LEU40 4.2 28.2 1.0
O A:ALA39 4.4 17.6 1.0
CB A:LEU40 4.6 24.4 1.0
O A:GLY41 4.7 21.4 1.0
CA A:HIS43 4.7 20.9 1.0
ND1 A:HIS43 4.8 22.7 1.0
O A:LEU40 4.8 22.9 1.0
CE1 A:HIS43 4.8 17.2 1.0
N A:LEU40 4.9 18.5 1.0

Chlorine binding site 2 out of 2 in 2dww

Go back to Chlorine Binding Sites List in 2dww
Chlorine binding site 2 out of 2 in the Crystal Structure of Bromodomain-Containing Protein 4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Bromodomain-Containing Protein 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:45.2
occ:1.00
O A:HOH341 3.0 42.7 1.0
O A:HOH227 3.2 24.5 1.0
CB A:LEU40 3.7 24.4 1.0
CD2 A:LEU40 3.9 26.2 1.0
CG A:LEU40 4.5 28.2 1.0
O A:HOH270 4.8 29.0 1.0
N A:LEU40 4.9 18.5 1.0
CA A:LEU40 5.0 22.0 1.0

Reference:

B.Padmanabhan, S.Yokoyama. Crystal Structure of Bromodomain-Containing Protein 4 To Be Published.
Page generated: Sat Dec 12 09:03:31 2020

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