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Chlorine in PDB 3fpl: Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh

Enzymatic activity of Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh

All present enzymatic activity of Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh:
1.1.1.2;

Protein crystallography data

The structure of Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh, PDB code: 3fpl was solved by F.Felix, E.Goihberg, L.Shimon, Y.Burstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.98 / 1.90
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 129.477, 129.477, 129.477, 90.00, 90.00, 90.00
R / Rfree (%) 12.2 / 17.2

Other elements in 3fpl:

The structure of Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh also contains other interesting chemical elements:

Arsenic (As) 1 atom
Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh (pdb code 3fpl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh, PDB code: 3fpl:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3fpl

Go back to Chlorine Binding Sites List in 3fpl
Chlorine binding site 1 out of 2 in the Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl353

b:42.1
occ:1.00
 CB A:ALA97 3.5 22.4 1.0
CG A:GLU94 3.7 20.3 1.0
CA A:GLU94 3.8 19.7 1.0
CB A:GLU94 4.1 21.4 1.0
O A:GLU94 4.5 18.6 1.0
N A:GLU94 4.7 18.3 1.0
C A:GLU94 4.7 20.3 1.0
O A:LEU93 4.7 19.1 1.0
CA A:ALA97 4.9 21.0 1.0
CD A:GLU94 4.9 23.7 1.0

Chlorine binding site 2 out of 2 in 3fpl

Go back to Chlorine Binding Sites List in 3fpl
Chlorine binding site 2 out of 2 in the Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Chimera of Alcohol Dehydrogenase By Exchange of the Cofactor Binding Domain Res 153-295 of C. Beijerinckii Adh By T. Brockii Adh within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl354

b:23.4
occ:1.00
 O A:HOH478 3.1 30.7 1.0
O A:HOH718 3.1 49.3 1.0
O A:HOH514 3.2 29.2 1.0
O A:HOH406 3.2 19.2 1.0
O A:HOH632 3.3 26.1 1.0
N A:VAL178 3.3 15.6 1.0
CD A:PRO177 3.5 19.8 1.0
N A:PRO177 3.6 18.6 1.0
CB A:VAL178 3.7 15.8 1.0
CG A:PRO177 3.7 18.6 1.0
CG2 A:VAL178 3.8 15.5 1.0
C A:GLY176 3.9 16.7 1.0
CA A:GLY176 4.0 15.8 1.0
CA A:VAL178 4.1 16.0 1.0
O A:HOH652 4.2 69.1 1.0
CG2 A:THR38 4.2 24.2 0.2
C A:PRO177 4.3 14.8 1.0
OG1 A:THR38 4.3 23.9 0.2
CA A:PRO177 4.4 15.6 1.0
O A:ALA242 4.5 24.6 1.0
CB A:PRO177 4.6 18.8 1.0
O A:GLY176 4.6 17.6 1.0
O A:HOH404 4.6 19.0 1.0
N A:GLY179 4.9 16.8 1.0
N A:GLY176 4.9 18.8 1.0
OG1 A:THR38 4.9 14.3 0.5
CG2 A:THR38 5.0 19.1 0.2

Reference:

E.Goihberg, M.Peretz, S.Tel-Or, O.Dym, L.Shimon, F.Frolow, Y.Burstein. Biochemical and Structural Properties of Chimeras Constructed By Exchange of Cofactor-Binding Domains in Alcohol Dehydrogenases From Thermophilic and Mesophilic Microorganisms Biochemistry V. 49 1943 2010.
ISSN: ISSN 0006-2960
PubMed: 20102159
DOI: 10.1021/BI901730X
Page generated: Sat Dec 12 09:42:23 2020

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