Chlorine in PDB 4air: Leishmania Major Cysteine Synthase
Enzymatic activity of Leishmania Major Cysteine Synthase
All present enzymatic activity of Leishmania Major Cysteine Synthase:
2.5.1.47;
Protein crystallography data
The structure of Leishmania Major Cysteine Synthase, PDB code: 4air
was solved by
P.K.Fyfe,
G.D.Westrop,
G.H.Coombs,
W.N.Hunter,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
45.00 /
1.80
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
48.958,
86.325,
134.019,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
15.663 /
20.826
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Leishmania Major Cysteine Synthase
(pdb code 4air). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Leishmania Major Cysteine Synthase, PDB code: 4air:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 4air
Go back to
Chlorine Binding Sites List in 4air
Chlorine binding site 1 out
of 2 in the Leishmania Major Cysteine Synthase
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Leishmania Major Cysteine Synthase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1428
b:13.1
occ:1.00
|
O
|
A:HOH2317
|
3.1
|
14.2
|
1.0
|
N
|
A:GLY275
|
3.2
|
11.9
|
1.0
|
N
|
A:GLY272
|
3.2
|
11.7
|
1.0
|
N
|
A:SER302
|
3.4
|
11.1
|
1.0
|
CD
|
A:PRO301
|
3.4
|
11.2
|
1.0
|
CA
|
A:GLY272
|
3.5
|
12.0
|
1.0
|
O
|
A:SER302
|
3.5
|
10.4
|
1.0
|
C
|
A:GLY272
|
3.6
|
12.7
|
1.0
|
O
|
A:GLY272
|
3.7
|
13.1
|
1.0
|
CA
|
A:GLY275
|
3.7
|
12.5
|
1.0
|
CB
|
A:SER302
|
3.8
|
13.3
|
1.0
|
N
|
A:PRO301
|
3.9
|
11.5
|
1.0
|
CB
|
A:CYS271
|
4.0
|
12.7
|
1.0
|
CA
|
A:SER302
|
4.0
|
11.5
|
1.0
|
CB
|
A:PRO301
|
4.0
|
11.1
|
1.0
|
CB
|
A:SER274
|
4.0
|
14.2
|
1.0
|
N
|
A:SER274
|
4.1
|
13.1
|
1.0
|
CG
|
A:PRO301
|
4.1
|
11.2
|
1.0
|
OG
|
A:SER302
|
4.1
|
15.2
|
1.0
|
C
|
A:SER274
|
4.1
|
12.8
|
1.0
|
C
|
A:SER302
|
4.2
|
11.1
|
1.0
|
C
|
A:PRO301
|
4.2
|
11.2
|
1.0
|
CA
|
A:PRO301
|
4.2
|
11.1
|
1.0
|
C
|
A:CYS271
|
4.3
|
12.1
|
1.0
|
CA
|
A:SER274
|
4.3
|
13.4
|
1.0
|
N
|
A:PHE273
|
4.3
|
13.6
|
1.0
|
OXT
|
A:FGA1330
|
4.4
|
16.2
|
1.0
|
SG
|
A:CYS271
|
4.5
|
14.9
|
1.0
|
CA
|
A:CYS271
|
4.6
|
12.3
|
1.0
|
C
|
A:ILE300
|
4.7
|
11.0
|
1.0
|
CG2
|
A:ILE300
|
4.8
|
11.4
|
1.0
|
C
|
A:PHE273
|
4.8
|
13.5
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 4air
Go back to
Chlorine Binding Sites List in 4air
Chlorine binding site 2 out
of 2 in the Leishmania Major Cysteine Synthase
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Leishmania Major Cysteine Synthase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1428
b:18.4
occ:1.00
|
OG
|
B:SER302
|
2.9
|
11.0
|
0.5
|
O
|
B:HOH2284
|
3.1
|
29.2
|
1.0
|
N
|
B:GLY272
|
3.2
|
13.2
|
1.0
|
N
|
B:GLY275
|
3.2
|
12.8
|
1.0
|
OG
|
B:SER274
|
3.2
|
15.3
|
0.5
|
N
|
B:SER302
|
3.3
|
11.1
|
0.5
|
N
|
B:SER302
|
3.3
|
11.0
|
0.5
|
O
|
B:SER302
|
3.5
|
10.3
|
0.5
|
CA
|
B:GLY272
|
3.5
|
12.7
|
1.0
|
O
|
B:SER302
|
3.6
|
10.4
|
0.5
|
CD
|
B:PRO301
|
3.6
|
11.1
|
1.0
|
C
|
B:GLY272
|
3.6
|
13.4
|
1.0
|
CB
|
B:SER302
|
3.7
|
11.1
|
0.5
|
O
|
B:GLY272
|
3.7
|
13.2
|
1.0
|
CA
|
B:GLY275
|
3.8
|
12.8
|
1.0
|
N
|
B:PRO301
|
3.9
|
10.4
|
1.0
|
CB
|
B:PRO301
|
3.9
|
11.1
|
1.0
|
CB
|
B:SER302
|
3.9
|
10.9
|
0.5
|
CA
|
B:SER302
|
3.9
|
11.0
|
0.5
|
CA
|
B:SER302
|
4.0
|
10.8
|
0.5
|
N
|
B:SER274
|
4.0
|
13.7
|
0.5
|
CB
|
B:SER274
|
4.0
|
13.2
|
0.5
|
N
|
B:SER274
|
4.0
|
14.2
|
0.5
|
OG
|
B:SER302
|
4.1
|
11.4
|
0.5
|
CG
|
B:PRO301
|
4.1
|
11.4
|
1.0
|
C
|
B:SER274
|
4.1
|
13.0
|
0.5
|
C
|
B:SER274
|
4.1
|
13.5
|
0.5
|
C
|
B:SER302
|
4.1
|
10.6
|
0.5
|
CB
|
B:CYS271
|
4.1
|
14.2
|
1.0
|
C
|
B:SER302
|
4.2
|
10.6
|
0.5
|
C
|
B:PRO301
|
4.2
|
11.1
|
1.0
|
CA
|
B:PRO301
|
4.2
|
10.8
|
1.0
|
O
|
B:FGA1328
|
4.2
|
26.4
|
1.0
|
CA
|
B:SER274
|
4.2
|
13.3
|
0.5
|
CB
|
B:SER274
|
4.3
|
14.7
|
0.5
|
CA
|
B:SER274
|
4.3
|
14.2
|
0.5
|
C
|
B:CYS271
|
4.3
|
13.3
|
1.0
|
N
|
B:PHE273
|
4.3
|
13.4
|
1.0
|
CA
|
B:CYS271
|
4.7
|
13.3
|
1.0
|
SG
|
B:CYS271
|
4.7
|
14.9
|
1.0
|
C
|
B:ILE300
|
4.7
|
11.0
|
1.0
|
C
|
B:PHE273
|
4.8
|
13.9
|
1.0
|
OG
|
B:SER274
|
5.0
|
12.9
|
0.5
|
|
Reference:
P.K.Fyfe,
G.D.Westrop,
T.Ramos,
S.Muller,
G.H.Coombs,
W.N.Hunter.
Structure of Leishmania Major Cysteine Synthase. Acta Crystallogr.,Sect.F V. 68 738 2012.
ISSN: ISSN 1744-3091
PubMed: 22750854
DOI: 10.1107/S1744309112019124
Page generated: Sun Jul 21 09:08:31 2024
|