Chlorine in PDB 4c8d: Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B)

The structure of Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B), PDB code: 4c8d was solved by M.Vollmar, C.Johansson, C.Gileadi, S.Goubin, A.Szykowska, T.Krojer, L.Crawley, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, U.Oppermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	69.12 / 2.18
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	83.340, 85.610, 117.130, 90.00, 90.00, 90.00
R / Rfree (%)	19.43 / 23.911

The structure of Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B) also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Chlorine atom in the Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B) (pdb code 4c8d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B), PDB code: 4c8d:

Chlorine binding site 1 out of 1 in the Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Jmjc Domain of Human Histone 3 Lysine- Specific Demethylase 3B (KDM3B) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl2726 b:54.1 occ:1.00 O A:HOH2001 2.9 53.9 1.0 O A:HOH2011 3.2 41.2 1.0 CG A:GLU1513 3.4 67.9 1.0 CB A:GLU1513 3.6 59.6 1.0 N A:GLU1513 3.6 45.8 1.0 CA A:LEU1511 3.7 46.5 1.0 C A:LEU1511 3.8 44.6 1.0 N A:PRO1512 3.9 41.5 1.0 CD A:PRO1512 3.9 44.2 1.0 CD1 A:TYR1514 4.1 48.5 1.0 CA A:GLU1513 4.1 52.2 1.0 CD2 A:LEU1511 4.2 50.7 1.0 O A:HOH2012 4.2 61.7 1.0 O A:LEU1511 4.3 41.7 1.0 CB A:TRP1402 4.3 44.3 1.0 CB A:LEU1511 4.3 48.9 1.0 CE1 A:TYR1514 4.4 55.5 1.0 CG A:PRO1512 4.5 44.0 1.0 N A:TYR1514 4.6 48.0 1.0 C A:PRO1512 4.7 45.0 1.0 CD A:GLU1513 4.7 85.2 1.0 CG A:LEU1511 4.7 52.5 1.0 CA A:PRO1512 4.8 44.8 1.0 C A:GLU1513 4.8 51.5 1.0 N A:LEU1511 4.9 46.2 1.0 CD1 A:TRP1402 4.9 47.7 1.0 OE2 A:GLU1513 4.9 86.0 1.0 CG A:TRP1402 4.9 45.5 1.0

M.Vollmar, C.Johansson, C.Gileadi, S.Goubin, A.Szykowska, T.Krojer, L.Crawley, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, U.Oppermann. Crystal Structure of Jmjc Domain of Human Histone 3 Lysine-Specific Demethylase 3B (KDM3B) To Be Published.