Chlorine in PDB 5caj: Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family

The structure of Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family, PDB code: 5caj was solved by J.Prahlad, J.Lin, M.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.91 / 1.65
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	45.664, 77.060, 184.161, 90.00, 90.00, 90.00
R / Rfree (%)	15.1 / 17.6

The binding sites of Chlorine atom in the Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family (pdb code 5caj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family, PDB code: 5caj:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl301 b:21.3 occ:1.00 NH1 A:ARG212 3.2 30.4 1.0 O A:HOH463 3.2 16.6 1.0 OG A:SER6 3.4 21.5 1.0 CG2 A:VAL87 3.6 24.7 1.0 CB A:SER6 3.7 18.2 1.0 CG A:LYS209 3.9 22.4 1.0 NZ A:LYS209 3.9 57.0 1.0 CD A:ARG212 3.9 17.6 1.0 N A:SER172 4.0 16.9 1.0 O A:HOH519 4.0 38.5 1.0 CB A:SER172 4.0 17.2 1.0 CZ A:ARG212 4.2 30.0 1.0 CB A:LYS209 4.4 19.5 1.0 CD A:LYS209 4.5 33.4 1.0 CA A:SER172 4.5 16.6 1.0 NE A:ARG212 4.5 20.5 1.0 CE A:LYS209 4.6 46.8 1.0 O A:HOH576 4.6 40.0 1.0 OG A:SER172 4.6 18.2 1.0 CA A:LYS209 4.7 20.0 1.0 C A:ALA171 4.7 15.1 1.0 O A:LEU170 4.8 15.2 1.0 N A:SER6 4.9 14.7 1.0 CA A:SER6 5.0 13.8 1.0

Chlorine binding site 2 out of 4 in the Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:32.3 occ:1.00 O A:HOH582 3.0 38.0 1.0 NE2 A:GLN14 3.1 32.0 1.0 N A:TYR13 3.2 15.4 1.0 O A:HOH626 3.2 46.0 1.0 CG A:GLN14 3.7 19.7 1.0 CB A:TYR13 3.8 16.3 1.0 CA A:TYR13 3.9 16.0 1.0 CD A:GLN14 3.9 25.9 1.0 N A:GLN14 4.1 17.0 1.0 C A:TYR13 4.1 16.9 1.0 C A:ASP12 4.2 17.1 1.0 CA A:ASP12 4.2 15.8 1.0 O A:LEU11 4.3 21.3 1.0 CD1 A:TYR13 4.4 14.3 1.0 CB A:GLN14 4.4 20.1 1.0 O A:HOH534 4.5 30.4 1.0 CG A:TYR13 4.6 15.0 1.0 OD1 A:ASP12 4.7 22.1 1.0 O A:HOH428 4.7 39.7 1.0 O A:TYR13 4.8 16.8 1.0 CA A:GLN14 4.9 16.4 1.0 N A:ASP12 4.9 17.1 1.0 C A:LEU11 4.9 19.8 1.0

Chlorine binding site 3 out of 4 in the Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl301 b:22.0 occ:1.00 NH1 B:ARG212 3.1 33.6 1.0 O B:HOH448 3.1 16.9 1.0 OG B:SER6 3.4 21.6 1.0 CG2 B:VAL87 3.6 27.4 1.0 CB B:SER6 3.8 17.6 1.0 O B:HOH552 3.8 38.5 1.0 CD B:ARG212 3.9 17.6 1.0 NZ B:LYS209 3.9 51.9 1.0 CG B:LYS209 3.9 26.2 1.0 N B:SER172 4.0 18.0 1.0 CB B:SER172 4.0 20.5 1.0 CZ B:ARG212 4.2 33.5 1.0 NE B:ARG212 4.5 20.1 1.0 CA B:SER172 4.5 18.3 1.0 CB B:LYS209 4.5 22.4 1.0 O B:HOH547 4.5 43.9 1.0 CD B:LYS209 4.6 34.0 1.0 OG B:SER172 4.6 20.0 1.0 C B:ALA171 4.6 18.9 1.0 CA B:LYS209 4.7 18.5 1.0 O B:LEU170 4.7 16.6 1.0 CE B:LYS209 4.8 44.1 1.0 CA B:ALA171 4.9 17.4 1.0 N B:SER6 5.0 15.6 1.0

Chlorine binding site 4 out of 4 in the Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl302 b:37.6 occ:1.00 O B:HOH533 2.8 36.8 1.0 N B:TYR13 3.1 15.4 1.0 NE2 B:GLN14 3.2 35.5 1.0 O B:HOH615 3.4 43.4 1.0 CB B:TYR13 3.7 16.1 1.0 CA B:TYR13 3.8 14.0 1.0 CG B:GLN14 3.9 22.0 1.0 CD B:GLN14 4.0 26.2 1.0 C B:TYR13 4.1 14.4 1.0 C B:ASP12 4.1 17.9 1.0 N B:GLN14 4.1 16.0 1.0 CA B:ASP12 4.2 15.5 1.0 O B:LEU11 4.2 21.0 1.0 CD1 B:TYR13 4.3 15.9 1.0 O B:HOH511 4.4 32.5 1.0 CB B:GLN14 4.5 18.1 1.0 CG B:TYR13 4.5 15.9 1.0 OD1 B:ASP12 4.7 21.8 1.0 O B:TYR13 4.8 16.0 1.0 O B:HOH428 4.8 41.3 1.0 N B:ASP12 4.9 15.6 1.0 C B:LEU11 4.9 18.9 1.0 CA B:GLN14 5.0 17.5 1.0

J.Prahlad, M.A.Wilson. Crystal Structure of E. Coli Yaaa, A Member of the DUF328/UPF0246 Family To Be Published.