Chlorine in PDB 5s2y: Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z19727416

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z19727416, PDB code: 5s2y was solved by D.Fearon, M.Schuller, V.L.Rangel, A.Douangamath, J.G.M.Rack, K.Zhu, A.Aimon, J.Brandao-Neto, A.Dias, L.Dunnet, T.J.Gorrie-Stone, A.J.Powell, T.Krojer, R.Skyner, W.Thompson, I.Ahel, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	88.10 / 1.05
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	88.097, 88.097, 38.972, 90, 90, 90
R / Rfree (%)	16.9 / 20.3

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z19727416 (pdb code 5s2y). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z19727416, PDB code: 5s2y:

Chlorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z19727416


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Z19727416 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl601 b:26.6 occ:0.36 CL B:W0M601 0.0 26.6 0.4 C5 B:W0M601 1.7 26.1 0.4 C4 B:W0M601 2.7 26.3 0.4 C6 B:W0M601 2.7 26.0 0.4 NZ B:LYS102 3.1 63.8 1.0 CG2 B:VAL41 3.6 15.7 1.0 OD1 B:ASN40 3.6 15.3 1.0 CG B:ASN40 3.6 14.6 1.0 CB B:ASN40 3.6 14.0 1.0 N B:TYR42 3.7 15.1 1.0 N B:VAL41 3.9 14.1 1.0 C3 B:W0M601 4.0 26.1 0.4 C7 B:W0M601 4.0 26.0 0.4 CB B:TYR42 4.0 16.9 1.0 O B:HOH804 4.0 17.3 1.0 CD2 B:TYR42 4.2 18.3 1.0 ND2 B:ASN40 4.3 14.6 1.0 C B:ASN40 4.4 13.5 1.0 CA B:TYR42 4.5 15.4 1.0 C2 B:W0M601 4.5 26.0 0.4 CA B:VAL41 4.5 14.4 1.0 CE B:LYS102 4.5 64.0 1.0 C B:VAL41 4.5 14.6 1.0 CA B:ASN40 4.6 13.6 1.0 CG B:TYR42 4.6 17.5 1.0 CB B:VAL41 4.7 15.1 1.0 O B:HOH702 4.8 32.6 1.0

D.Fearon, M.Schuller, V.L.Rangel, A.Douangamath, J.G.M.Rack, K.Zhu, A.Aimon, J.Brandao-Neto, A.Dias, L.Dunnet, T.J.Gorrie-Stone, A.J.Powell, T.Krojer, R.Skyner, W.Thompson, I.Ahel, F.Von Delft. Pandda Analysis Group Deposition To Be Published.