Chlorine in PDB 6mr3: Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans

Protein crystallography data

The structure of Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans, PDB code: 6mr3 was solved by P.J.Stogios, M.Cuff, X.Xu, H.Cui, R.Di Leo, V.Yim, S.Chin, A.Savchenko, A.J.Joachimiak, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.21 / 2.05
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 152.030, 54.507, 111.013, 90.00, 125.38, 90.00
R / Rfree (%) 18.6 / 21.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans (pdb code 6mr3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans, PDB code: 6mr3:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 6mr3

Go back to Chlorine Binding Sites List in 6mr3
Chlorine binding site 1 out of 4 in the Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:33.4
occ:0.66
N A:VAL180 3.3 40.0 1.0
N A:GLY255 3.5 39.5 1.0
CA A:ARG179 3.7 43.1 1.0
CG A:ARG179 3.7 39.7 1.0
CA A:GLY255 3.8 43.6 1.0
C A:ARG179 4.0 42.9 1.0
O A:VAL180 4.0 36.4 1.0
CB A:TYR254 4.0 36.7 1.0
CB A:ARG179 4.2 42.4 1.0
CA A:VAL180 4.2 39.2 1.0
C A:TYR254 4.4 36.9 1.0
CB A:VAL180 4.4 41.5 1.0
C A:VAL180 4.6 37.2 1.0
O A:SER178 4.6 46.5 1.0
CA A:TYR254 4.6 34.9 1.0
O A:HOH697 4.7 52.5 1.0
O A:HOH748 4.7 45.1 1.0
C A:GLY255 4.8 45.9 1.0
N A:ARG179 4.8 45.8 1.0
CG2 A:VAL180 4.9 44.1 1.0
CG A:TYR254 5.0 36.6 1.0
CD A:ARG179 5.0 37.1 1.0
N A:GLU256 5.0 52.5 1.0

Chlorine binding site 2 out of 4 in 6mr3

Go back to Chlorine Binding Sites List in 6mr3
Chlorine binding site 2 out of 4 in the Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:45.6
occ:0.99
O A:GLY355 3.1 17.4 1.0
N A:LEU281 3.1 16.8 1.0
N A:GLY355 3.1 19.6 1.0
CB A:SER280 3.2 17.6 1.0
OG A:SER280 3.2 19.7 1.0
CB A:LEU281 3.3 18.0 1.0
CA A:LEU281 3.6 17.5 1.0
OG1 A:THR354 3.6 26.4 1.0
CA A:THR354 3.7 19.1 1.0
C A:THR354 3.9 21.2 1.0
C A:SER280 3.9 21.2 1.0
C A:GLY355 4.0 19.2 1.0
O A:HOH754 4.1 43.6 1.0
CA A:GLY355 4.1 17.6 1.0
O A:HOH764 4.1 28.0 1.0
CA A:SER280 4.2 19.0 1.0
CD2 A:LEU281 4.2 16.8 1.0
O A:HOH662 4.2 23.8 1.0
CB A:THR354 4.2 21.4 1.0
CG A:LEU281 4.3 18.1 1.0
O A:LEU353 4.6 19.3 1.0
N A:THR354 4.9 19.5 1.0
O A:SER280 5.0 20.3 1.0
CD1 A:LEU281 5.0 16.3 1.0

Chlorine binding site 3 out of 4 in 6mr3

Go back to Chlorine Binding Sites List in 6mr3
Chlorine binding site 3 out of 4 in the Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:31.8
occ:0.74
N B:VAL180 3.2 40.0 1.0
N B:GLY255 3.4 45.2 1.0
CA B:ARG179 3.7 45.0 1.0
CA B:GLY255 3.7 46.6 1.0
O B:VAL180 3.9 35.2 1.0
C B:ARG179 3.9 42.5 1.0
CB B:TYR254 3.9 41.4 1.0
CG B:ARG179 4.0 42.5 1.0
CA B:VAL180 4.2 36.4 1.0
CB B:ARG179 4.3 44.8 1.0
C B:TYR254 4.3 41.6 1.0
CB B:VAL180 4.3 43.7 1.0
C B:VAL180 4.5 34.6 1.0
O B:SER178 4.5 46.0 1.0
O B:HOH804 4.6 48.6 1.0
CA B:TYR254 4.6 38.1 1.0
C B:GLY255 4.7 46.4 1.0
N B:ARG179 4.7 42.1 1.0
CG2 B:VAL180 4.8 44.7 1.0
N B:GLU256 4.9 48.3 1.0
CG B:TYR254 4.9 41.4 1.0
CD1 B:TYR254 4.9 38.9 1.0

Chlorine binding site 4 out of 4 in 6mr3

Go back to Chlorine Binding Sites List in 6mr3
Chlorine binding site 4 out of 4 in the Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the Competence-Damaged Protein (Cina) Superfamily Protein From Streptococcus Mutans within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:30.4
occ:0.96
N B:GLY187 3.2 21.5 1.0
O B:HOH640 3.3 37.2 1.0
O B:HOH774 3.5 30.1 1.0
CB B:HIS190 3.7 30.1 1.0
ND1 B:HIS190 3.9 36.3 1.0
CA B:ILE186 3.9 21.6 1.0
C B:ILE186 4.0 21.3 1.0
CG1 B:ILE186 4.0 24.5 1.0
CA B:GLY187 4.0 24.9 1.0
CG B:HIS190 4.2 33.9 1.0
CB B:ILE186 4.5 23.3 1.0
O B:GLY185 4.6 28.5 1.0
O B:GLY187 4.9 24.0 1.0
C B:GLY187 4.9 24.7 1.0
N B:ILE186 5.0 23.6 1.0

Reference:

P.J.Stogios, P.J.Stogios, M.Cuff, X.Xu, H.Cui, R.Di Leo, V.Yim, S.Chin, A.Savchenko, A.J.Joachimiak, Midwest Center For Structural Genomics (Mcsg). N/A N/A.
Page generated: Sat Dec 12 13:22:01 2020

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