Chlorine in PDB 6nuz: Structural Basis For Anti-Alpha-Galactosyl Response

Protein crystallography data

The structure of Structural Basis For Anti-Alpha-Galactosyl Response, PDB code: 6nuz was solved by D.B.Langley, D.Christ, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.68 / 1.90
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 73.540, 71.370, 95.821, 90.00, 104.94, 90.00
R / Rfree (%) 18.6 / 21.8

Other elements in 6nuz:

The structure of Structural Basis For Anti-Alpha-Galactosyl Response also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Basis For Anti-Alpha-Galactosyl Response (pdb code 6nuz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural Basis For Anti-Alpha-Galactosyl Response, PDB code: 6nuz:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6nuz

Go back to Chlorine Binding Sites List in 6nuz
Chlorine binding site 1 out of 2 in the Structural Basis For Anti-Alpha-Galactosyl Response


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Basis For Anti-Alpha-Galactosyl Response within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl301

b:27.6
occ:1.00
NE2 L:GLN110 3.2 16.6 1.0
O L:HOH405 3.3 17.6 1.0
O L:HOH458 3.6 39.4 1.0
C L:GLY109 3.6 19.4 1.0
O L:HOH502 3.6 29.3 1.0
CA L:GLY109 3.7 19.0 1.0
OH L:TYR142 3.8 17.3 1.0
O L:GLY109 3.9 19.9 1.0
CG L:GLN110 3.9 18.6 1.0
N L:GLN110 4.0 19.4 1.0
CE1 L:TYR142 4.0 16.4 1.0
CD L:GLN110 4.0 18.4 1.0
N L:GLY109 4.1 18.5 1.0
CZ L:TYR142 4.2 17.4 1.0
CB L:GLN110 4.2 19.3 1.0
MG L:MG303 4.7 29.7 1.0
NZ L:LYS168 4.7 40.1 1.0
CA L:GLN110 4.7 20.1 1.0
CD1 L:TYR142 4.9 16.8 1.0
O L:HOH500 4.9 39.6 1.0

Chlorine binding site 2 out of 2 in 6nuz

Go back to Chlorine Binding Sites List in 6nuz
Chlorine binding site 2 out of 2 in the Structural Basis For Anti-Alpha-Galactosyl Response


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural Basis For Anti-Alpha-Galactosyl Response within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl302

b:52.2
occ:1.00
OG L:SER170 3.5 35.6 1.0
N L:ASN171 3.5 27.1 1.0
CG L:ASN171 3.6 24.5 1.0
CB L:ASN171 3.7 26.1 1.0
ND2 L:ASN171 3.8 24.2 1.0
CB L:GLN169 3.9 22.3 1.0
OD1 L:ASN171 4.0 23.1 1.0
N L:SER170 4.0 27.4 1.0
NE2 L:GLN169 4.0 23.3 1.0
O H:HOH331 4.1 31.5 1.0
CA L:ASN171 4.2 25.9 1.0
C L:SER170 4.3 29.4 1.0
O L:HOH413 4.4 40.4 1.0
CA L:SER170 4.4 30.6 1.0
O L:HOH469 4.5 48.1 1.0
CB L:SER170 4.5 31.6 1.0
CA H:GLY167 4.6 34.2 1.0
CD L:GLN169 4.7 22.8 1.0
C L:GLN169 4.7 25.8 1.0
CG L:GLN169 4.7 21.5 1.0
CA L:GLN169 4.8 23.3 1.0
O H:VAL168 4.9 26.6 1.0
N H:GLY167 4.9 34.3 1.0

Reference:

D.B.Langley, D.Christ. Genetic and Structural Basis For the Human Anti-Alpha-Galactosyl Response To Be Published.
Page generated: Sat Dec 12 13:24:50 2020

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