Chlorine in PDB 7k0b: The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
Enzymatic activity of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
All present enzymatic activity of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step:
4.2.1.20;
Protein crystallography data
The structure of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step, PDB code: 7k0b
was solved by
E.Hilario,
M.F.Dunn,
L.J.Mueller,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
39.18 /
1.57
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
182.939,
58.379,
67.199,
90,
94.63,
90
|
R / Rfree (%)
|
19.9 /
23.6
|
Other elements in 7k0b:
The structure of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
(pdb code 7k0b). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the
The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step, PDB code: 7k0b:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
Chlorine binding site 1 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 1 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl313
b:59.5
occ:1.00
|
O
|
A:HOH459
|
2.5
|
38.6
|
1.0
|
O
|
A:HOH436
|
2.7
|
34.2
|
1.0
|
O
|
A:VAL123
|
3.0
|
21.8
|
1.0
|
NH1
|
A:ARG3
|
3.3
|
24.9
|
1.0
|
O
|
A:HOH556
|
3.7
|
39.8
|
1.0
|
OD1
|
A:ASP124
|
3.7
|
21.8
|
1.0
|
CG
|
A:MET1
|
3.8
|
54.1
|
1.0
|
C
|
A:GLY122
|
3.8
|
22.8
|
1.0
|
O
|
A:GLY122
|
3.9
|
22.7
|
1.0
|
C
|
A:VAL123
|
3.9
|
21.4
|
1.0
|
CA
|
A:GLY122
|
3.9
|
22.8
|
1.0
|
N
|
A:VAL123
|
4.3
|
21.3
|
1.0
|
CB
|
A:MET1
|
4.4
|
50.6
|
1.0
|
CZ
|
A:ARG3
|
4.5
|
26.5
|
1.0
|
O
|
A:HOH440
|
4.5
|
25.6
|
1.0
|
CG
|
A:ASP124
|
4.6
|
21.0
|
1.0
|
O
|
A:ASN147
|
4.6
|
25.3
|
1.0
|
N
|
A:MET1
|
4.6
|
53.3
|
1.0
|
CA
|
A:ASP124
|
4.6
|
20.1
|
1.0
|
O
|
A:GLU119
|
4.7
|
24.3
|
1.0
|
N
|
A:ASP124
|
4.7
|
20.5
|
1.0
|
CA
|
A:VAL123
|
4.8
|
21.6
|
1.0
|
NH2
|
A:ARG3
|
4.8
|
30.0
|
1.0
|
CD1
|
A:ILE148
|
4.9
|
24.2
|
1.0
|
O
|
A:HOH474
|
4.9
|
47.2
|
1.0
|
N
|
A:GLY122
|
5.0
|
22.4
|
1.0
|
|
Chlorine binding site 2 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 2 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl314
b:53.3
occ:1.00
|
O
|
A:HOH606
|
2.8
|
42.2
|
1.0
|
N
|
A:GLN32
|
2.9
|
31.7
|
1.0
|
O
|
A:HOH522
|
3.0
|
42.9
|
1.0
|
O1
|
A:EDO301
|
3.0
|
50.5
|
1.0
|
CB
|
A:GLN32
|
3.4
|
32.7
|
1.0
|
N
|
A:GLU31
|
3.4
|
32.0
|
1.0
|
C
|
A:GLY29
|
3.4
|
29.7
|
1.0
|
CA
|
A:GLY29
|
3.5
|
30.5
|
1.0
|
O
|
A:GLY29
|
3.6
|
29.7
|
1.0
|
CA
|
A:GLN32
|
3.7
|
31.1
|
1.0
|
CB
|
A:GLU31
|
3.8
|
34.2
|
1.0
|
C
|
A:GLU31
|
3.8
|
31.8
|
1.0
|
CA
|
A:GLU31
|
3.8
|
32.3
|
1.0
|
N
|
A:ILE30
|
3.8
|
29.9
|
1.0
|
N
|
A:GLY29
|
4.0
|
30.5
|
1.0
|
C
|
A:ILE30
|
4.2
|
31.2
|
1.0
|
C1
|
A:EDO301
|
4.3
|
46.5
|
1.0
|
O
|
A:HOH539
|
4.4
|
42.7
|
1.0
|
O
|
A:HOH520
|
4.5
|
35.6
|
1.0
|
O2
|
A:EDO301
|
4.5
|
47.7
|
1.0
|
CA
|
A:ILE30
|
4.6
|
30.1
|
1.0
|
O
|
A:HOH613
|
4.8
|
50.5
|
1.0
|
O
|
A:HOH525
|
4.8
|
38.6
|
1.0
|
CG
|
A:GLN32
|
4.9
|
34.6
|
1.0
|
C
|
A:PRO28
|
4.9
|
32.0
|
1.0
|
N
|
A:SER33
|
4.9
|
28.0
|
1.0
|
C
|
A:GLN32
|
4.9
|
29.8
|
1.0
|
O
|
A:ILE30
|
4.9
|
30.3
|
1.0
|
O
|
A:GLU31
|
5.0
|
30.9
|
1.0
|
C2
|
A:EDO301
|
5.0
|
49.3
|
1.0
|
|
Chlorine binding site 3 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 3 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl421
b:58.5
occ:1.00
|
O
|
B:GLY179
|
3.0
|
30.3
|
1.0
|
N
|
B:GLU182
|
3.1
|
27.9
|
1.0
|
O
|
B:HOH665
|
3.2
|
37.2
|
1.0
|
C
|
B:SER180
|
3.3
|
25.9
|
1.0
|
CG
|
B:GLU182
|
3.3
|
40.0
|
1.0
|
N
|
B:TYR181
|
3.4
|
25.8
|
1.0
|
CB
|
B:GLU182
|
3.4
|
33.0
|
1.0
|
CA
|
B:SER180
|
3.5
|
25.9
|
1.0
|
C
|
B:GLY179
|
3.6
|
28.8
|
1.0
|
CD
|
B:GLU182
|
3.8
|
45.2
|
1.0
|
N
|
B:SER180
|
3.8
|
26.6
|
1.0
|
O
|
B:SER180
|
3.8
|
24.7
|
1.0
|
CA
|
B:GLU182
|
3.8
|
29.5
|
1.0
|
OE1
|
B:GLU182
|
4.0
|
49.0
|
1.0
|
C
|
B:TYR181
|
4.1
|
27.4
|
1.0
|
O
|
B:HOH610
|
4.2
|
45.6
|
1.0
|
CA
|
B:TYR181
|
4.3
|
27.0
|
1.0
|
OE2
|
B:GLU182
|
4.5
|
49.0
|
1.0
|
CD1
|
B:TYR181
|
4.5
|
31.2
|
1.0
|
N
|
B:THR183
|
4.7
|
25.7
|
1.0
|
CG
|
B:TYR181
|
4.8
|
29.2
|
1.0
|
CE1
|
B:TYR181
|
4.8
|
33.4
|
1.0
|
C
|
B:GLU182
|
4.8
|
27.8
|
1.0
|
CB
|
B:SER180
|
4.9
|
26.1
|
1.0
|
CA
|
B:GLY179
|
4.9
|
28.7
|
1.0
|
|
Chlorine binding site 4 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 4 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl422
b:62.5
occ:1.00
|
O
|
B:ILE262
|
3.4
|
34.5
|
1.0
|
NE2
|
B:HIS267
|
3.5
|
32.0
|
1.0
|
CG2
|
B:ILE262
|
4.1
|
33.6
|
1.0
|
CD2
|
B:HIS267
|
4.4
|
31.9
|
1.0
|
CB
|
B:HIS273
|
4.4
|
36.3
|
1.0
|
CE1
|
B:HIS267
|
4.4
|
32.6
|
1.0
|
C
|
B:ILE262
|
4.5
|
35.1
|
1.0
|
CA
|
B:GLY265
|
4.5
|
35.6
|
1.0
|
CG
|
B:HIS273
|
4.6
|
37.7
|
1.0
|
CD2
|
B:HIS273
|
4.7
|
38.2
|
1.0
|
N
|
B:GLY265
|
4.8
|
36.8
|
1.0
|
|
Chlorine binding site 5 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 5 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl423
b:72.9
occ:1.00
|
O
|
B:ASP218
|
3.0
|
23.4
|
1.0
|
OD1
|
B:ASP218
|
3.4
|
28.8
|
1.0
|
O
|
B:HOH608
|
3.7
|
43.4
|
1.0
|
C
|
B:ASP218
|
4.1
|
23.1
|
1.0
|
CG
|
B:ASP218
|
4.2
|
27.6
|
1.0
|
CA
|
B:ASP218
|
4.5
|
23.6
|
1.0
|
O
|
B:HOH807
|
4.6
|
47.0
|
1.0
|
OD2
|
B:ASP218
|
4.8
|
29.4
|
1.0
|
CB
|
B:ASP218
|
5.0
|
25.0
|
1.0
|
|
Chlorine binding site 6 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 6 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl424
b:70.9
occ:1.00
|
O
|
B:LYS272
|
4.0
|
36.2
|
1.0
|
CG
|
B:ARG275
|
4.0
|
26.9
|
0.7
|
O
|
B:HIS273
|
4.2
|
35.6
|
1.0
|
C
|
B:HIS273
|
4.3
|
33.4
|
1.0
|
N
|
B:ARG275
|
4.3
|
27.1
|
0.7
|
CA
|
B:ARG275
|
4.4
|
25.7
|
0.7
|
C
|
B:GLY274
|
4.4
|
28.9
|
1.0
|
N
|
B:ARG275
|
4.4
|
26.8
|
0.3
|
CA
|
B:ARG275
|
4.4
|
25.1
|
0.3
|
O
|
B:GLY274
|
4.5
|
32.7
|
1.0
|
N
|
B:GLY274
|
4.7
|
30.7
|
1.0
|
CA
|
B:HIS273
|
4.8
|
33.7
|
1.0
|
CB
|
B:ARG275
|
4.8
|
24.9
|
0.3
|
CB
|
B:ARG275
|
4.8
|
26.2
|
0.7
|
O
|
B:HOH716
|
4.8
|
30.4
|
1.0
|
C
|
B:LYS272
|
5.0
|
35.0
|
1.0
|
|
Chlorine binding site 7 out
of 7 in 7k0b
Go back to
Chlorine Binding Sites List in 7k0b
Chlorine binding site 7 out
of 7 in the The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl425
b:77.2
occ:1.00
|
O
|
B:SER143
|
4.0
|
36.5
|
1.0
|
CB
|
B:PHE147
|
4.1
|
30.4
|
1.0
|
CB
|
B:SER143
|
4.2
|
37.2
|
1.0
|
C
|
B:SER143
|
4.2
|
34.3
|
1.0
|
O
|
B:HOH764
|
4.4
|
40.3
|
1.0
|
CG
|
B:PHE147
|
4.4
|
34.0
|
1.0
|
N
|
B:PRO144
|
4.4
|
33.6
|
1.0
|
CA
|
B:PRO144
|
4.5
|
31.2
|
1.0
|
CD2
|
B:PHE147
|
4.6
|
35.4
|
1.0
|
O
|
B:HOH887
|
4.6
|
54.0
|
1.0
|
CA
|
B:SER143
|
4.8
|
35.5
|
1.0
|
|
Reference:
E.Hilario,
M.F.Dunn,
L.J.Mueller.
The Internal Aldimine Form of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with Cesium Ion at the Metal Coordination Site. A Random Beta-P270L Mutation Was Inserted During Pcr Step. To Be Published.
Page generated: Mon Jul 29 23:21:03 2024
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