Chlorine in PDB 7k7r: EBNA1 Peptide AA386-405 with Fab MS39P2W174

The structure of EBNA1 Peptide AA386-405 with Fab MS39P2W174, PDB code: 7k7r was solved by T.V.Lanz, W.H.Robinson, K.M.Jude, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.14 / 2.50
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	119.657, 137.562, 178.996, 90, 90, 90
R / Rfree (%)	21.1 / 25.2

The binding sites of Chlorine atom in the EBNA1 Peptide AA386-405 with Fab MS39P2W174 (pdb code 7k7r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the EBNA1 Peptide AA386-405 with Fab MS39P2W174, PDB code: 7k7r:

Chlorine binding site 1 out of 1 in the EBNA1 Peptide AA386-405 with Fab MS39P2W174


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of EBNA1 Peptide AA386-405 with Fab MS39P2W174 within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl301 b:45.1 occ:1.00 NH1 D:ARG51 3.4 42.8 1.0 NH2 D:ARG51 3.7 35.5 1.0 CE2 D:TYR54 4.0 30.7 1.0 CZ D:ARG51 4.0 33.1 1.0 CG E:TYR102 4.1 31.3 1.0 CD1 E:TYR102 4.1 36.8 1.0 CD2 D:TYR54 4.2 28.3 1.0 CZ D:TYR54 4.2 32.2 1.0 CB E:TYR102 4.4 27.0 1.0 CD2 E:TYR102 4.5 42.2 1.0 CE1 E:TYR102 4.5 36.5 1.0 OH D:TYR54 4.6 33.8 1.0 CE1 D:TYR54 4.7 34.5 1.0 CG D:TYR54 4.7 31.2 1.0 CE2 E:TYR102 4.8 58.1 1.0 CZ E:TYR102 4.8 47.9 1.0 CD1 D:TYR54 4.9 35.4 1.0 OD2 E:ASP104 5.0 27.3 1.0

T.V.Lanz, R.C.Brewer, P.P.Ho, J.S.Moon, K.M.Jude, D.Fernandez, R.A.Fernandes, A.M.Gomez, G.S.Nadj, C.M.Bartley, R.D.Schubert, I.A.Hawes, S.E.Vazquez, M.Iyer, J.B.Zuchero, B.Teegen, J.E.Dunn, C.B.Lock, L.B.Kipp, V.C.Cotham, B.M.Ueberheide, B.T.Aftab, M.S.Anderson, J.L.Derisi, M.R.Wilson, R.J.M.Bashford-Rogers, M.Platten, K.C.Garcia, L.Steinman, W.H.Robinson. Clonally Expanded B Cells in Multiple Sclerosis Bind Ebv EBNA1 and Glialcam. Nature V. 603 321 2022.
ISSN: ESSN 1476-4687
PubMed: 35073561
DOI: 10.1038/S41586-022-04432-7