Chlorine in PDB 7kjq: Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram
Protein crystallography data
The structure of Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram, PDB code: 7kjq
was solved by
W.G.Walton,
M.R.Redinbo,
J.L.Dangl,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
40.64 /
1.35
|
Space group
|
F 2 2 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
55.096,
114.648,
115.257,
90,
90,
90
|
R / Rfree (%)
|
17.5 /
18.6
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram
(pdb code 7kjq). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram, PDB code: 7kjq:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7kjq
Go back to
Chlorine Binding Sites List in 7kjq
Chlorine binding site 1 out
of 3 in the Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:19.2
occ:0.91
|
CL07
|
A:WOM201
|
0.0
|
19.2
|
0.9
|
C06
|
A:WOM201
|
1.8
|
14.3
|
0.9
|
H131
|
A:WOM201
|
2.6
|
21.2
|
0.9
|
C01
|
A:WOM201
|
2.7
|
16.4
|
0.9
|
C05
|
A:WOM201
|
2.7
|
15.6
|
0.9
|
N13
|
A:WOM201
|
3.0
|
17.6
|
0.9
|
OG
|
A:SER50
|
3.0
|
20.5
|
1.0
|
CL08
|
A:WOM201
|
3.2
|
18.8
|
0.9
|
O
|
A:VAL65
|
3.3
|
16.1
|
0.6
|
O
|
A:VAL65
|
3.7
|
16.4
|
0.4
|
H132
|
A:WOM201
|
3.8
|
21.2
|
0.9
|
C02
|
A:WOM201
|
3.9
|
17.2
|
0.9
|
N04
|
A:WOM201
|
4.0
|
16.5
|
0.9
|
CG1
|
A:VAL65
|
4.0
|
18.2
|
0.4
|
O
|
A:ARG46
|
4.1
|
16.7
|
1.0
|
C
|
A:VAL65
|
4.1
|
16.5
|
0.6
|
CA
|
A:THR66
|
4.2
|
15.8
|
1.0
|
C
|
A:VAL65
|
4.2
|
15.9
|
0.4
|
CB
|
A:SER50
|
4.4
|
19.9
|
1.0
|
C03
|
A:WOM201
|
4.4
|
16.0
|
0.9
|
CG2
|
A:VAL65
|
4.5
|
19.8
|
0.6
|
CB
|
A:ARG46
|
4.5
|
15.8
|
1.0
|
N
|
A:THR66
|
4.5
|
17.0
|
1.0
|
CG2
|
A:THR66
|
4.6
|
17.6
|
1.0
|
CA
|
A:ARG46
|
4.6
|
15.4
|
1.0
|
CG
|
A:ARG46
|
4.7
|
15.6
|
1.0
|
C
|
A:ARG46
|
4.8
|
16.0
|
1.0
|
CB
|
A:THR66
|
4.9
|
16.1
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7kjq
Go back to
Chlorine Binding Sites List in 7kjq
Chlorine binding site 2 out
of 3 in the Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:18.8
occ:0.91
|
CL08
|
A:WOM201
|
0.0
|
18.8
|
0.9
|
C05
|
A:WOM201
|
1.7
|
15.6
|
0.9
|
N04
|
A:WOM201
|
2.6
|
16.5
|
0.9
|
C06
|
A:WOM201
|
2.7
|
14.3
|
0.9
|
CL07
|
A:WOM201
|
3.2
|
19.2
|
0.9
|
CB
|
A:ALA49
|
3.6
|
18.4
|
1.0
|
NE1
|
A:TRP45
|
3.8
|
18.5
|
1.0
|
C03
|
A:WOM201
|
3.8
|
16.0
|
0.9
|
CE2
|
A:TRP45
|
3.9
|
17.2
|
1.0
|
C01
|
A:WOM201
|
4.0
|
16.4
|
0.9
|
CZ2
|
A:TRP45
|
4.1
|
17.4
|
1.0
|
CA
|
A:ARG46
|
4.1
|
15.4
|
1.0
|
O
|
A:ARG46
|
4.4
|
16.7
|
1.0
|
C02
|
A:WOM201
|
4.4
|
17.2
|
0.9
|
CD1
|
A:TRP45
|
4.5
|
16.7
|
1.0
|
O
|
A:TRP45
|
4.6
|
16.2
|
1.0
|
CG
|
A:ARG46
|
4.7
|
15.6
|
1.0
|
OG
|
A:SER50
|
4.7
|
20.5
|
1.0
|
CD2
|
A:TRP45
|
4.7
|
16.5
|
1.0
|
C
|
A:ARG46
|
4.8
|
16.0
|
1.0
|
CB
|
A:ARG46
|
4.8
|
15.8
|
1.0
|
CA
|
A:ALA49
|
4.9
|
16.9
|
1.0
|
CH2
|
A:TRP45
|
4.9
|
18.1
|
1.0
|
N
|
A:ARG46
|
4.9
|
15.2
|
1.0
|
N
|
A:SER50
|
5.0
|
18.0
|
1.0
|
C
|
A:ALA49
|
5.0
|
17.5
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 7kjq
Go back to
Chlorine Binding Sites List in 7kjq
Chlorine binding site 3 out
of 3 in the Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the Marr Family Transcriptional Regulator From Variovorax Paradoxus Bound to Picloram within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:20.6
occ:0.91
|
CL12
|
A:WOM201
|
0.0
|
20.6
|
0.9
|
C02
|
A:WOM201
|
1.8
|
17.2
|
0.9
|
H132
|
A:WOM201
|
2.6
|
21.2
|
0.9
|
C01
|
A:WOM201
|
2.7
|
16.4
|
0.9
|
C03
|
A:WOM201
|
2.7
|
16.0
|
0.9
|
N13
|
A:WOM201
|
2.9
|
17.6
|
0.9
|
C09
|
A:WOM201
|
3.0
|
17.5
|
0.9
|
O10
|
A:WOM201
|
3.1
|
19.1
|
0.9
|
NE
|
A:ARG46
|
3.3
|
18.0
|
1.0
|
NH2
|
A:ARG46
|
3.4
|
24.7
|
1.0
|
O
|
A:HOH399
|
3.5
|
31.8
|
1.0
|
CZ
|
A:ARG46
|
3.5
|
22.4
|
1.0
|
H131
|
A:WOM201
|
3.8
|
21.2
|
0.9
|
O11
|
A:WOM201
|
3.8
|
18.7
|
0.9
|
CG2
|
A:VAL67
|
3.9
|
16.9
|
0.6
|
O
|
A:HOH423
|
3.9
|
43.9
|
1.0
|
C06
|
A:WOM201
|
3.9
|
14.3
|
0.9
|
N04
|
A:WOM201
|
4.0
|
16.5
|
0.9
|
CD
|
A:ARG46
|
4.2
|
19.2
|
1.0
|
OG
|
A:SER28
|
4.4
|
18.9
|
1.0
|
C05
|
A:WOM201
|
4.4
|
15.6
|
0.9
|
NH1
|
A:ARG46
|
4.5
|
29.8
|
1.0
|
CG2
|
A:VAL67
|
4.6
|
17.9
|
0.4
|
CG
|
A:ARG46
|
4.7
|
15.6
|
1.0
|
O
|
A:HOH332
|
4.8
|
17.2
|
1.0
|
O
|
A:HOH322
|
5.0
|
32.0
|
1.0
|
O
|
A:THR66
|
5.0
|
17.3
|
1.0
|
|
Reference:
J.M.Conway,
I.Salas-Gonzalez,
W.G.Walton,
M.R.Redinbo,
J.L.Dangl.
Structural Basis For Auxin Recognition By Plant Commensal Bacteria To Be Published.
Page generated: Mon Jul 29 23:35:24 2024
|