Chlorine in PDB 7kox: Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
Other elements in 7kox:
The structure of Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
(pdb code 7kox). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the
Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State, PDB code: 7kox:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
Chlorine binding site 1 out
of 5 in 7kox
Go back to
Chlorine Binding Sites List in 7kox
Chlorine binding site 1 out
of 5 in the Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl503
b:70.9
occ:1.00
|
CL
|
A:EPJ503
|
0.0
|
70.9
|
1.0
|
C10
|
A:EPJ503
|
1.7
|
70.9
|
1.0
|
N2
|
A:EPJ503
|
2.6
|
70.9
|
1.0
|
C9
|
A:EPJ503
|
2.7
|
70.9
|
1.0
|
H9
|
A:EPJ503
|
2.8
|
70.9
|
1.0
|
HB2
|
B:LEU108
|
2.9
|
67.8
|
1.0
|
HB3
|
B:LEU108
|
3.0
|
67.8
|
1.0
|
O
|
B:HOH601
|
3.1
|
70.4
|
1.0
|
CB
|
B:LEU108
|
3.4
|
67.8
|
1.0
|
HB3
|
A:SER149
|
3.5
|
69.3
|
1.0
|
HD22
|
B:LEU108
|
3.6
|
67.8
|
1.0
|
H
|
B:LEU108
|
3.6
|
67.8
|
1.0
|
HA
|
A:SER149
|
3.7
|
69.3
|
1.0
|
HB3
|
B:GLN116
|
3.7
|
68.8
|
1.0
|
HD13
|
B:LEU118
|
3.7
|
68.1
|
1.0
|
C11
|
A:EPJ503
|
3.9
|
70.9
|
1.0
|
O
|
B:ASN106
|
3.9
|
68.5
|
1.0
|
C8
|
A:EPJ503
|
4.0
|
70.9
|
1.0
|
HB2
|
A:SER149
|
4.0
|
69.3
|
1.0
|
HD23
|
B:LEU108
|
4.0
|
67.8
|
1.0
|
N
|
B:LEU108
|
4.1
|
67.8
|
1.0
|
O
|
B:GLN116
|
4.1
|
68.8
|
1.0
|
CB
|
A:SER149
|
4.1
|
69.3
|
1.0
|
H
|
B:LEU118
|
4.2
|
68.1
|
1.0
|
CD2
|
B:LEU108
|
4.2
|
67.8
|
1.0
|
HB2
|
B:LEU118
|
4.2
|
68.1
|
1.0
|
HA
|
B:TYR117
|
4.2
|
67.1
|
1.0
|
HB2
|
B:GLN116
|
4.4
|
68.8
|
1.0
|
CA
|
A:SER149
|
4.4
|
69.3
|
1.0
|
CA
|
B:LEU108
|
4.4
|
67.8
|
1.0
|
CG
|
B:LEU108
|
4.4
|
67.8
|
1.0
|
C7
|
A:EPJ503
|
4.5
|
70.9
|
1.0
|
CB
|
B:GLN116
|
4.5
|
68.8
|
1.0
|
HA
|
B:VAL107
|
4.5
|
67.8
|
1.0
|
C
|
B:GLN116
|
4.5
|
68.8
|
1.0
|
HD12
|
B:LEU118
|
4.5
|
68.1
|
1.0
|
CD1
|
B:LEU118
|
4.6
|
68.1
|
1.0
|
H11
|
A:EPJ503
|
4.6
|
70.9
|
1.0
|
OE1
|
B:GLN116
|
4.7
|
68.8
|
1.0
|
H8
|
A:EPJ503
|
4.7
|
70.9
|
1.0
|
HH
|
A:TYR194
|
4.7
|
72.9
|
1.0
|
N
|
B:LEU118
|
4.8
|
68.1
|
1.0
|
HD13
|
B:LEU108
|
4.9
|
67.8
|
1.0
|
C
|
B:ASN106
|
4.9
|
68.5
|
1.0
|
N
|
B:TYR117
|
4.9
|
67.1
|
1.0
|
HA
|
B:LEU108
|
4.9
|
67.8
|
1.0
|
C
|
B:VAL107
|
4.9
|
67.8
|
1.0
|
HD1
|
A:TRP148
|
4.9
|
68.6
|
1.0
|
CA
|
B:TYR117
|
4.9
|
67.1
|
1.0
|
O
|
A:TRP148
|
5.0
|
68.6
|
1.0
|
|
Chlorine binding site 2 out
of 5 in 7kox
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Chlorine Binding Sites List in 7kox
Chlorine binding site 2 out
of 5 in the Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl503
b:71.7
occ:1.00
|
CL
|
B:EPJ503
|
0.0
|
71.7
|
1.0
|
C10
|
B:EPJ503
|
1.7
|
71.7
|
1.0
|
N2
|
B:EPJ503
|
2.6
|
71.7
|
1.0
|
C9
|
B:EPJ503
|
2.7
|
71.7
|
1.0
|
H9
|
B:EPJ503
|
2.8
|
71.7
|
1.0
|
HB2
|
C:LEU108
|
2.9
|
68.2
|
1.0
|
HB3
|
C:LEU108
|
3.0
|
68.2
|
1.0
|
O
|
C:HOH601
|
3.1
|
72.5
|
1.0
|
CB
|
C:LEU108
|
3.4
|
68.2
|
1.0
|
HD22
|
C:LEU108
|
3.5
|
68.2
|
1.0
|
HB3
|
B:SER149
|
3.5
|
69.1
|
1.0
|
H
|
C:LEU108
|
3.6
|
68.2
|
1.0
|
HB3
|
C:GLN116
|
3.7
|
69.4
|
1.0
|
HA
|
B:SER149
|
3.7
|
69.1
|
1.0
|
HD13
|
C:LEU118
|
3.7
|
68.1
|
1.0
|
C11
|
B:EPJ503
|
3.9
|
71.7
|
1.0
|
C8
|
B:EPJ503
|
4.0
|
71.7
|
1.0
|
HD23
|
C:LEU108
|
4.0
|
68.2
|
1.0
|
O
|
C:ASN106
|
4.0
|
69.0
|
1.0
|
HB2
|
B:SER149
|
4.0
|
69.1
|
1.0
|
N
|
C:LEU108
|
4.1
|
68.2
|
1.0
|
CD2
|
C:LEU108
|
4.1
|
68.2
|
1.0
|
CB
|
B:SER149
|
4.1
|
69.1
|
1.0
|
O
|
C:GLN116
|
4.1
|
69.4
|
1.0
|
HB2
|
C:LEU118
|
4.2
|
68.1
|
1.0
|
H
|
C:LEU118
|
4.2
|
68.1
|
1.0
|
HA
|
C:TYR117
|
4.3
|
67.4
|
1.0
|
HB2
|
C:GLN116
|
4.3
|
69.4
|
1.0
|
CG
|
C:LEU108
|
4.4
|
68.2
|
1.0
|
CA
|
C:LEU108
|
4.4
|
68.2
|
1.0
|
CA
|
B:SER149
|
4.4
|
69.1
|
1.0
|
CB
|
C:GLN116
|
4.4
|
69.4
|
1.0
|
C7
|
B:EPJ503
|
4.5
|
71.7
|
1.0
|
HA
|
C:VAL107
|
4.5
|
68.0
|
1.0
|
C
|
C:GLN116
|
4.5
|
69.4
|
1.0
|
HD12
|
C:LEU118
|
4.5
|
68.1
|
1.0
|
CD1
|
C:LEU118
|
4.6
|
68.1
|
1.0
|
H11
|
B:EPJ503
|
4.6
|
71.7
|
1.0
|
OE1
|
C:GLN116
|
4.6
|
69.4
|
1.0
|
H8
|
B:EPJ503
|
4.7
|
71.7
|
1.0
|
HH
|
B:TYR194
|
4.7
|
72.7
|
1.0
|
HD13
|
C:LEU108
|
4.8
|
68.2
|
1.0
|
N
|
C:LEU118
|
4.8
|
68.1
|
1.0
|
HA
|
C:LEU108
|
4.9
|
68.2
|
1.0
|
N
|
C:TYR117
|
4.9
|
67.4
|
1.0
|
HD1
|
B:TRP148
|
4.9
|
68.7
|
1.0
|
C
|
C:VAL107
|
4.9
|
68.0
|
1.0
|
C
|
C:ASN106
|
5.0
|
69.0
|
1.0
|
O
|
B:TRP148
|
5.0
|
68.7
|
1.0
|
HD21
|
C:LEU108
|
5.0
|
68.2
|
1.0
|
CA
|
C:TYR117
|
5.0
|
67.4
|
1.0
|
|
Chlorine binding site 3 out
of 5 in 7kox
Go back to
Chlorine Binding Sites List in 7kox
Chlorine binding site 3 out
of 5 in the Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl503
b:72.4
occ:1.00
|
CL
|
C:EPJ503
|
0.0
|
72.4
|
1.0
|
C10
|
C:EPJ503
|
1.7
|
72.4
|
1.0
|
N2
|
C:EPJ503
|
2.6
|
72.4
|
1.0
|
C9
|
C:EPJ503
|
2.7
|
72.4
|
1.0
|
H9
|
C:EPJ503
|
2.8
|
72.4
|
1.0
|
HB2
|
D:LEU108
|
3.0
|
68.2
|
1.0
|
HB3
|
D:LEU108
|
3.0
|
68.2
|
1.0
|
O
|
D:HOH601
|
3.2
|
71.8
|
1.0
|
CB
|
D:LEU108
|
3.5
|
68.2
|
1.0
|
HD22
|
D:LEU108
|
3.5
|
68.2
|
1.0
|
HB3
|
C:SER149
|
3.5
|
69.4
|
1.0
|
H
|
D:LEU108
|
3.7
|
68.2
|
1.0
|
HA
|
C:SER149
|
3.7
|
69.4
|
1.0
|
HD13
|
D:LEU118
|
3.7
|
68.7
|
1.0
|
HB3
|
D:GLN116
|
3.7
|
69.5
|
1.0
|
C11
|
C:EPJ503
|
3.9
|
72.4
|
1.0
|
C8
|
C:EPJ503
|
4.0
|
72.4
|
1.0
|
HD23
|
D:LEU108
|
4.0
|
68.2
|
1.0
|
HB2
|
C:SER149
|
4.0
|
69.4
|
1.0
|
O
|
D:ASN106
|
4.0
|
69.3
|
1.0
|
CD2
|
D:LEU108
|
4.1
|
68.2
|
1.0
|
CB
|
C:SER149
|
4.1
|
69.4
|
1.0
|
N
|
D:LEU108
|
4.2
|
68.2
|
1.0
|
HB2
|
D:LEU118
|
4.2
|
68.7
|
1.0
|
O
|
D:GLN116
|
4.2
|
69.5
|
1.0
|
H
|
D:LEU118
|
4.2
|
68.7
|
1.0
|
HA
|
D:TYR117
|
4.3
|
67.7
|
1.0
|
HB2
|
D:GLN116
|
4.4
|
69.5
|
1.0
|
CA
|
C:SER149
|
4.4
|
69.4
|
1.0
|
CG
|
D:LEU108
|
4.4
|
68.2
|
1.0
|
CA
|
D:LEU108
|
4.4
|
68.2
|
1.0
|
C7
|
C:EPJ503
|
4.5
|
72.4
|
1.0
|
CB
|
D:GLN116
|
4.5
|
69.5
|
1.0
|
HD12
|
D:LEU118
|
4.5
|
68.7
|
1.0
|
CD1
|
D:LEU118
|
4.5
|
68.7
|
1.0
|
C
|
D:GLN116
|
4.6
|
69.5
|
1.0
|
H11
|
C:EPJ503
|
4.6
|
72.4
|
1.0
|
HA
|
D:VAL107
|
4.6
|
68.1
|
1.0
|
OE1
|
D:GLN116
|
4.6
|
69.5
|
1.0
|
H8
|
C:EPJ503
|
4.7
|
72.4
|
1.0
|
HH
|
C:TYR194
|
4.7
|
73.3
|
1.0
|
N
|
D:LEU118
|
4.8
|
68.7
|
1.0
|
HD13
|
D:LEU108
|
4.9
|
68.2
|
1.0
|
HD1
|
C:TRP148
|
4.9
|
69.8
|
1.0
|
O
|
C:TRP148
|
5.0
|
69.8
|
1.0
|
N
|
D:TYR117
|
5.0
|
67.7
|
1.0
|
HA
|
D:LEU108
|
5.0
|
68.2
|
1.0
|
HD21
|
D:LEU108
|
5.0
|
68.2
|
1.0
|
|
Chlorine binding site 4 out
of 5 in 7kox
Go back to
Chlorine Binding Sites List in 7kox
Chlorine binding site 4 out
of 5 in the Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl503
b:71.9
occ:1.00
|
CL
|
D:EPJ503
|
0.0
|
71.9
|
1.0
|
C10
|
D:EPJ503
|
1.7
|
71.9
|
1.0
|
N2
|
D:EPJ503
|
2.6
|
71.9
|
1.0
|
C9
|
D:EPJ503
|
2.7
|
71.9
|
1.0
|
H9
|
D:EPJ503
|
2.8
|
71.9
|
1.0
|
HB2
|
E:LEU108
|
2.9
|
67.9
|
1.0
|
O
|
E:HOH601
|
3.0
|
71.2
|
1.0
|
HB3
|
E:LEU108
|
3.0
|
67.9
|
1.0
|
CB
|
E:LEU108
|
3.4
|
67.9
|
1.0
|
HB3
|
D:SER149
|
3.5
|
69.2
|
1.0
|
HD22
|
E:LEU108
|
3.5
|
67.9
|
1.0
|
H
|
E:LEU108
|
3.6
|
67.9
|
1.0
|
HA
|
D:SER149
|
3.7
|
69.2
|
1.0
|
HB3
|
E:GLN116
|
3.7
|
69.2
|
1.0
|
HD13
|
E:LEU118
|
3.7
|
68.9
|
1.0
|
C11
|
D:EPJ503
|
3.9
|
71.9
|
1.0
|
C8
|
D:EPJ503
|
4.0
|
71.9
|
1.0
|
O
|
E:ASN106
|
4.0
|
68.9
|
1.0
|
HD23
|
E:LEU108
|
4.0
|
67.9
|
1.0
|
HB2
|
D:SER149
|
4.0
|
69.2
|
1.0
|
N
|
E:LEU108
|
4.1
|
67.9
|
1.0
|
CB
|
D:SER149
|
4.1
|
69.2
|
1.0
|
CD2
|
E:LEU108
|
4.1
|
67.9
|
1.0
|
O
|
E:GLN116
|
4.1
|
69.2
|
1.0
|
HB2
|
E:LEU118
|
4.2
|
68.9
|
1.0
|
H
|
E:LEU118
|
4.2
|
68.9
|
1.0
|
HA
|
E:TYR117
|
4.3
|
67.4
|
1.0
|
HB2
|
E:GLN116
|
4.4
|
69.2
|
1.0
|
CA
|
D:SER149
|
4.4
|
69.2
|
1.0
|
CA
|
E:LEU108
|
4.4
|
67.9
|
1.0
|
CG
|
E:LEU108
|
4.4
|
67.9
|
1.0
|
C7
|
D:EPJ503
|
4.5
|
71.9
|
1.0
|
CB
|
E:GLN116
|
4.5
|
69.2
|
1.0
|
HA
|
E:VAL107
|
4.5
|
68.2
|
1.0
|
HD12
|
E:LEU118
|
4.5
|
68.9
|
1.0
|
C
|
E:GLN116
|
4.5
|
69.2
|
1.0
|
CD1
|
E:LEU118
|
4.6
|
68.9
|
1.0
|
H11
|
D:EPJ503
|
4.6
|
71.9
|
1.0
|
OE1
|
E:GLN116
|
4.7
|
69.2
|
1.0
|
H8
|
D:EPJ503
|
4.7
|
71.9
|
1.0
|
HH
|
D:TYR194
|
4.7
|
73.4
|
1.0
|
N
|
E:LEU118
|
4.8
|
68.9
|
1.0
|
HD13
|
E:LEU108
|
4.8
|
67.9
|
1.0
|
HA
|
E:LEU108
|
4.9
|
67.9
|
1.0
|
HD1
|
D:TRP148
|
4.9
|
69.1
|
1.0
|
C
|
E:ASN106
|
4.9
|
68.9
|
1.0
|
N
|
E:TYR117
|
4.9
|
67.4
|
1.0
|
C
|
E:VAL107
|
5.0
|
68.2
|
1.0
|
O
|
D:TRP148
|
5.0
|
69.1
|
1.0
|
CA
|
E:TYR117
|
5.0
|
67.4
|
1.0
|
|
Chlorine binding site 5 out
of 5 in 7kox
Go back to
Chlorine Binding Sites List in 7kox
Chlorine binding site 5 out
of 5 in the Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Alpha-7 Nicotinic Acetylcholine Receptor Bound to Epibatidine and Pnu- 120596 in the Activated State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl503
b:71.1
occ:1.00
|
CL
|
E:EPJ503
|
0.0
|
71.1
|
1.0
|
C10
|
E:EPJ503
|
1.7
|
71.1
|
1.0
|
N2
|
E:EPJ503
|
2.6
|
71.1
|
1.0
|
C9
|
E:EPJ503
|
2.7
|
71.1
|
1.0
|
H9
|
E:EPJ503
|
2.8
|
71.1
|
1.0
|
HB2
|
A:LEU108
|
2.9
|
67.8
|
1.0
|
O
|
A:HOH601
|
3.0
|
70.7
|
1.0
|
HB3
|
A:LEU108
|
3.0
|
67.8
|
1.0
|
CB
|
A:LEU108
|
3.4
|
67.8
|
1.0
|
HB3
|
E:SER149
|
3.5
|
69.0
|
1.0
|
HD22
|
A:LEU108
|
3.5
|
67.8
|
1.0
|
H
|
A:LEU108
|
3.6
|
67.8
|
1.0
|
HA
|
E:SER149
|
3.7
|
69.0
|
1.0
|
HB3
|
A:GLN116
|
3.7
|
69.2
|
1.0
|
HD13
|
A:LEU118
|
3.8
|
68.2
|
1.0
|
C11
|
E:EPJ503
|
3.9
|
71.1
|
1.0
|
O
|
A:ASN106
|
4.0
|
68.9
|
1.0
|
C8
|
E:EPJ503
|
4.0
|
71.1
|
1.0
|
HD23
|
A:LEU108
|
4.0
|
67.8
|
1.0
|
HB2
|
E:SER149
|
4.0
|
69.0
|
1.0
|
N
|
A:LEU108
|
4.1
|
67.8
|
1.0
|
CB
|
E:SER149
|
4.1
|
69.0
|
1.0
|
CD2
|
A:LEU108
|
4.1
|
67.8
|
1.0
|
O
|
A:GLN116
|
4.2
|
69.2
|
1.0
|
HB2
|
A:LEU118
|
4.2
|
68.2
|
1.0
|
H
|
A:LEU118
|
4.2
|
68.2
|
1.0
|
HA
|
A:TYR117
|
4.3
|
67.1
|
1.0
|
HB2
|
A:GLN116
|
4.4
|
69.2
|
1.0
|
CA
|
E:SER149
|
4.4
|
69.0
|
1.0
|
CA
|
A:LEU108
|
4.4
|
67.8
|
1.0
|
CG
|
A:LEU108
|
4.4
|
67.8
|
1.0
|
C7
|
E:EPJ503
|
4.5
|
71.1
|
1.0
|
CB
|
A:GLN116
|
4.5
|
69.2
|
1.0
|
HA
|
A:VAL107
|
4.5
|
68.2
|
1.0
|
HD12
|
A:LEU118
|
4.5
|
68.2
|
1.0
|
C
|
A:GLN116
|
4.6
|
69.2
|
1.0
|
H11
|
E:EPJ503
|
4.6
|
71.1
|
1.0
|
CD1
|
A:LEU118
|
4.6
|
68.2
|
1.0
|
OE1
|
A:GLN116
|
4.7
|
69.2
|
1.0
|
H8
|
E:EPJ503
|
4.7
|
71.1
|
1.0
|
HH
|
E:TYR194
|
4.7
|
73.1
|
1.0
|
HD13
|
A:LEU108
|
4.8
|
67.8
|
1.0
|
N
|
A:LEU118
|
4.8
|
68.2
|
1.0
|
HA
|
A:LEU108
|
4.9
|
67.8
|
1.0
|
C
|
A:ASN106
|
4.9
|
68.9
|
1.0
|
HD1
|
E:TRP148
|
4.9
|
69.2
|
1.0
|
C
|
A:VAL107
|
5.0
|
68.2
|
1.0
|
O
|
E:TRP148
|
5.0
|
69.2
|
1.0
|
N
|
A:TYR117
|
5.0
|
67.1
|
1.0
|
|
Reference:
C.M.Noviello,
R.E.Hibbs.
Structure and Gating Mechanism of the Alpha-7 Nicotinic Acetylcholine Receptor Cell(Cambridge,Mass.) 2021.
ISSN: ISSN 0092-8674
DOI: 10.1016/J.CELL.2021.02.049
Page generated: Mon Jul 29 23:41:01 2024
|