Chlorine in PDB 7kte: Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN)

Enzymatic activity of Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN)

All present enzymatic activity of Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN):
2.7.7.7;

Protein crystallography data

The structure of Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN), PDB code: 7kte was solved by J.A.Jamsen, S.H.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.96 / 1.48
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.94, 68.523, 110.605, 90, 90, 90
R / Rfree (%) 15.7 / 17.7

Other elements in 7kte:

The structure of Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN) also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN) (pdb code 7kte). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN), PDB code: 7kte:

Chlorine binding site 1 out of 1 in 7kte

Go back to Chlorine Binding Sites List in 7kte
Chlorine binding site 1 out of 1 in the Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:42.1
occ:0.68
 OG A:SER172 1.8 34.6 0.3
O A:HOH788 2.9 36.1 1.0
CB A:SER172 3.0 30.1 0.3
CB A:SER172 3.2 30.4 0.7
N A:ARG175 3.2 16.9 0.5
N A:ARG175 3.2 16.8 0.5
CA A:SER172 3.3 24.5 0.3
CA A:SER172 3.3 23.6 0.7
N A:GLY174 3.4 18.5 1.0
C A:SER172 3.4 20.5 0.7
C A:SER172 3.5 20.9 0.3
NH1 A:ARG175 3.5 29.4 0.5
CG A:ARG175 3.6 21.6 0.5
CG A:ARG175 3.7 21.3 0.5
CA A:GLY174 3.7 19.0 1.0
O A:SER172 3.8 20.9 0.7
O A:SER172 3.8 20.5 0.3
N A:GLU173 3.9 21.4 1.0
C A:GLY174 4.0 16.3 1.0
CB A:ARG175 4.0 19.4 0.5
CB A:ARG175 4.0 19.2 0.5
OG A:SER172 4.1 34.2 0.7
CD A:ARG175 4.1 22.1 0.5
O6 D:DG1 4.1 20.5 1.0
CD A:ARG175 4.2 21.5 0.5
CA A:ARG175 4.2 17.2 0.5
CA A:ARG175 4.2 17.2 0.5
O D:HOH113 4.3 30.6 0.5
C A:GLU173 4.4 15.9 1.0
C6 D:DG1 4.5 17.9 1.0
CZ A:ARG175 4.6 26.8 0.5
O A:HOH797 4.7 39.6 1.0
C5 D:DG1 4.7 16.2 1.0
CA A:GLU173 4.8 19.2 1.0
N A:SER172 4.8 24.4 0.3
N7 D:DG1 4.8 18.9 1.0
N A:SER172 4.8 23.3 0.7
NE A:ARG175 4.9 24.3 0.5

Reference:

J.A.Jamsen, A.Sassa, D.D.Shock, W.A.Beard, S.H.Wilson. Dna Polymerase Mu, 8-Oxodgtp:Ct Reaction State Ternary Complex, 50 Mm MG2+ (90MIN) To Be Published.
Page generated: Mon Jul 29 23:44:48 2024

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