Chlorine in PDB 7l7g: Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ)
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ)
(pdb code 7l7g). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ), PDB code: 7l7g:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 7l7g
Go back to
Chlorine Binding Sites List in 7l7g
Chlorine binding site 1 out
of 4 in the Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl401
b:52.6
occ:0.50
|
CL1
|
D:C7B401
|
0.0
|
52.6
|
0.5
|
CL2
|
D:C7B401
|
0.2
|
52.6
|
0.5
|
C29
|
D:C7B401
|
1.7
|
52.6
|
0.5
|
C30
|
D:C7B401
|
2.0
|
52.6
|
0.5
|
C27
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
C25
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
C28
|
D:C7B401
|
2.9
|
52.6
|
0.5
|
C26
|
D:C7B401
|
3.0
|
52.6
|
0.5
|
CG2
|
C:VAL225
|
3.5
|
42.6
|
1.0
|
CG2
|
C:THR215
|
3.9
|
46.4
|
1.0
|
CD2
|
F:LEU485
|
4.0
|
48.3
|
1.0
|
C23
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
C21
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
CG1
|
F:VAL177
|
4.1
|
49.4
|
1.0
|
CE2
|
F:PHE180
|
4.1
|
48.7
|
1.0
|
C24
|
D:C7B401
|
4.2
|
52.6
|
0.5
|
C22
|
D:C7B401
|
4.2
|
52.6
|
0.5
|
C19
|
D:C7B401
|
4.5
|
52.6
|
0.5
|
CD1
|
C:ILE190
|
4.5
|
42.7
|
1.0
|
CB
|
C:VAL225
|
4.6
|
42.6
|
1.0
|
CG2
|
F:VAL177
|
4.7
|
49.4
|
1.0
|
CB
|
C:THR215
|
4.7
|
46.4
|
1.0
|
CG1
|
C:ILE190
|
4.8
|
42.7
|
1.0
|
OG1
|
C:THR215
|
4.8
|
46.4
|
1.0
|
C20
|
D:C7B401
|
4.8
|
52.6
|
0.5
|
CE2
|
F:PHE452
|
4.8
|
46.5
|
1.0
|
CD2
|
F:PHE180
|
4.9
|
48.7
|
1.0
|
CB
|
F:VAL177
|
4.9
|
49.4
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 7l7g
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Chlorine Binding Sites List in 7l7g
Chlorine binding site 2 out
of 4 in the Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl401
b:52.6
occ:0.50
|
CL1
|
D:C7B401
|
0.0
|
52.6
|
0.5
|
CL2
|
D:C7B401
|
0.3
|
52.6
|
0.5
|
C29
|
D:C7B401
|
1.8
|
52.6
|
0.5
|
C30
|
D:C7B401
|
1.8
|
52.6
|
0.5
|
C27
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
C26
|
D:C7B401
|
2.8
|
52.6
|
0.5
|
C25
|
D:C7B401
|
2.8
|
52.6
|
0.5
|
C28
|
D:C7B401
|
2.8
|
52.6
|
0.5
|
CG2
|
D:VAL225
|
3.0
|
42.8
|
1.0
|
C23
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
CG2
|
D:THR215
|
4.1
|
46.8
|
1.0
|
C21
|
D:C7B401
|
4.1
|
52.6
|
0.5
|
C22
|
D:C7B401
|
4.1
|
52.6
|
0.5
|
C24
|
D:C7B401
|
4.1
|
52.6
|
0.5
|
CB
|
D:VAL225
|
4.2
|
42.8
|
1.0
|
CD1
|
D:ILE190
|
4.2
|
42.9
|
1.0
|
CD2
|
E:LEU485
|
4.3
|
48.7
|
1.0
|
CE2
|
E:PHE180
|
4.4
|
48.9
|
1.0
|
CG1
|
D:ILE190
|
4.5
|
42.9
|
1.0
|
CG1
|
E:VAL177
|
4.5
|
49.8
|
1.0
|
C19
|
D:C7B401
|
4.6
|
52.6
|
0.5
|
C20
|
D:C7B401
|
4.6
|
52.6
|
0.5
|
CG2
|
D:ILE190
|
4.7
|
42.9
|
1.0
|
CB
|
D:THR215
|
4.7
|
46.8
|
1.0
|
CE2
|
E:PHE452
|
4.8
|
46.5
|
1.0
|
OG1
|
D:THR215
|
4.9
|
46.8
|
1.0
|
CG1
|
D:VAL225
|
5.0
|
42.8
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 7l7g
Go back to
Chlorine Binding Sites List in 7l7g
Chlorine binding site 3 out
of 4 in the Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl401
b:52.6
occ:0.50
|
CL2
|
D:C7B401
|
0.0
|
52.6
|
0.5
|
CL1
|
D:C7B401
|
0.3
|
52.6
|
0.5
|
C29
|
D:C7B401
|
1.7
|
52.6
|
0.5
|
C30
|
D:C7B401
|
1.7
|
52.6
|
0.5
|
C27
|
D:C7B401
|
2.6
|
52.6
|
0.5
|
C28
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
C26
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
C25
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
CG2
|
D:VAL225
|
3.2
|
42.8
|
1.0
|
C23
|
D:C7B401
|
3.9
|
52.6
|
0.5
|
C24
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
C21
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
C22
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
CG2
|
D:THR215
|
4.1
|
46.8
|
1.0
|
CD2
|
E:LEU485
|
4.2
|
48.7
|
1.0
|
CE2
|
E:PHE180
|
4.2
|
48.9
|
1.0
|
CG1
|
E:VAL177
|
4.3
|
49.8
|
1.0
|
CB
|
D:VAL225
|
4.3
|
42.8
|
1.0
|
CD1
|
D:ILE190
|
4.4
|
42.9
|
1.0
|
C19
|
D:C7B401
|
4.5
|
52.6
|
0.5
|
C20
|
D:C7B401
|
4.5
|
52.6
|
0.5
|
CG1
|
D:ILE190
|
4.6
|
42.9
|
1.0
|
CE2
|
E:PHE452
|
4.7
|
46.5
|
1.0
|
CB
|
D:THR215
|
4.8
|
46.8
|
1.0
|
OG1
|
D:THR215
|
4.9
|
46.8
|
1.0
|
CG2
|
D:ILE190
|
4.9
|
42.9
|
1.0
|
CZ
|
E:PHE452
|
5.0
|
46.5
|
1.0
|
CG2
|
E:VAL177
|
5.0
|
49.8
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 7l7g
Go back to
Chlorine Binding Sites List in 7l7g
Chlorine binding site 4 out
of 4 in the Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ)
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Electron Cryo-Microscopy of the Eukaryotic Translation Initiation Factor 2B From Homo Sapiens (Updated Model of Pdb Id: 6CAJ) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl401
b:52.6
occ:0.50
|
CL2
|
D:C7B401
|
0.0
|
52.6
|
0.5
|
CL1
|
D:C7B401
|
0.2
|
52.6
|
0.5
|
C29
|
D:C7B401
|
1.5
|
52.6
|
0.5
|
C30
|
D:C7B401
|
1.8
|
52.6
|
0.5
|
C27
|
D:C7B401
|
2.5
|
52.6
|
0.5
|
C25
|
D:C7B401
|
2.5
|
52.6
|
0.5
|
C28
|
D:C7B401
|
2.7
|
52.6
|
0.5
|
C26
|
D:C7B401
|
2.8
|
52.6
|
0.5
|
CG2
|
C:VAL225
|
3.5
|
42.6
|
1.0
|
C23
|
D:C7B401
|
3.8
|
52.6
|
0.5
|
C21
|
D:C7B401
|
3.8
|
52.6
|
0.5
|
CG2
|
C:THR215
|
3.9
|
46.4
|
1.0
|
C24
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
C22
|
D:C7B401
|
4.0
|
52.6
|
0.5
|
CG1
|
F:VAL177
|
4.1
|
49.4
|
1.0
|
CD2
|
F:LEU485
|
4.2
|
48.3
|
1.0
|
CE2
|
F:PHE180
|
4.3
|
48.7
|
1.0
|
C19
|
D:C7B401
|
4.3
|
52.6
|
0.5
|
CD1
|
C:ILE190
|
4.3
|
42.7
|
1.0
|
C20
|
D:C7B401
|
4.6
|
52.6
|
0.5
|
CG1
|
C:ILE190
|
4.6
|
42.7
|
1.0
|
CB
|
C:THR215
|
4.6
|
46.4
|
1.0
|
CB
|
C:VAL225
|
4.7
|
42.6
|
1.0
|
OG1
|
C:THR215
|
4.7
|
46.4
|
1.0
|
CG2
|
F:VAL177
|
4.7
|
49.4
|
1.0
|
CE2
|
F:PHE452
|
4.9
|
46.5
|
1.0
|
CB
|
F:VAL177
|
4.9
|
49.4
|
1.0
|
CG2
|
C:ILE190
|
5.0
|
42.7
|
1.0
|
|
Reference:
M.Schoof,
M.Boone,
L.Wang,
R.Lawrence,
A.Frost,
P.Walter.
EIF2B Conformation and Assembly State Regulates the Integrated Stress Response. Elife V. 10 2021.
ISSN: ESSN 2050-084X
PubMed: 33688831
DOI: 10.7554/ELIFE.65703
Page generated: Mon Jul 29 23:55:14 2024
|