Chlorine in PDB 7l9r: Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica

Protein crystallography data

The structure of Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica, PDB code: 7l9r was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.73 / 2.40
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 85.9, 85.9, 424.52, 90, 90, 120
R / Rfree (%) 18.7 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica (pdb code 7l9r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica, PDB code: 7l9r:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7l9r

Go back to Chlorine Binding Sites List in 7l9r
Chlorine binding site 1 out of 2 in the Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:90.5
occ:1.00
NE A:ARG65 3.4 62.4 1.0
NH2 A:ARG65 3.7 62.3 1.0
OD2 A:ASP95 3.9 46.8 1.0
OD1 A:ASP95 4.0 58.6 1.0
OG1 A:THR67 4.0 57.2 1.0
CZ A:ARG65 4.0 61.8 1.0
CG A:ASP95 4.0 55.5 1.0
CD1 A:LEU63 4.2 75.0 1.0
CG A:ARG65 4.3 59.8 1.0
NH2 A:ARG326 4.4 54.9 1.0
CB A:LEU63 4.4 75.5 1.0
CD A:ARG65 4.4 61.1 1.0
CA A:THR67 4.7 52.0 1.0
CB A:THR67 4.8 56.6 1.0
O A:CYS66 4.9 56.7 1.0
CG A:LEU63 4.9 75.3 1.0

Chlorine binding site 2 out of 2 in 7l9r

Go back to Chlorine Binding Sites List in 7l9r
Chlorine binding site 2 out of 2 in the Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:92.6
occ:1.00
NE B:ARG65 3.1 70.2 1.0
NH2 B:ARG65 3.4 74.3 1.0
OD2 B:ASP95 3.5 60.0 1.0
CZ B:ARG65 3.7 73.2 1.0
OD1 B:ASP95 3.8 61.5 1.0
CG B:ASP95 3.8 63.1 1.0
OG1 B:THR67 3.8 67.5 1.0
NH2 B:ARG326 3.9 64.6 1.0
CG B:ARG65 4.1 67.1 1.0
CD B:ARG65 4.2 68.4 1.0
CA B:THR67 4.4 59.5 1.0
CD1 B:LEU63 4.4 67.5 1.0
CB B:LEU63 4.5 78.4 1.0
O B:CYS66 4.6 61.4 1.0
CB B:THR67 4.6 59.4 1.0
CG2 B:THR67 4.8 60.1 1.0
N B:THR67 4.8 62.9 1.0
CB B:ASP95 4.8 47.9 1.0
C B:CYS66 4.9 62.6 1.0
CZ B:ARG326 4.9 60.6 1.0

Reference:

J.Abendroth, D.R.Davies, D.M.Dranow, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Crystal Structure of A Putative Deoxyhypusine Synthase From Entamoeba Histolytica To Be Published.
Page generated: Wed Mar 3 12:59:28 2021

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