Chlorine in PDB 7lep: The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution

The structure of The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution also contains other interesting chemical elements:

Fluorine

(F)

18 atoms

The binding sites of Chlorine atom in the The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution (pdb code 7lep). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution, PDB code: 7lep:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution within 5.0Å range: probe atom residue distance (Å) B Occ G:Cl501 b:30.3 occ:1.00 CL1 G:XVD501 0.0 30.3 1.0 C1 G:XVD501 1.8 30.3 1.0 C2 G:XVD501 2.7 30.3 1.0 C6 G:XVD501 2.8 30.3 1.0 C7 G:XVD501 3.1 30.3 1.0 CA G:GLY209 3.4 27.9 1.0 C8 G:XVD501 3.4 30.3 1.0 CZ A:PHE527 3.7 22.5 1.0 C12 G:XVD501 3.8 30.3 1.0 C G:GLY209 3.9 27.9 1.0 C3 G:XVD501 4.0 30.3 1.0 C5 G:XVD501 4.0 30.3 1.0 CD1 G:TYR206 4.2 29.5 1.0 O G:GLY209 4.3 27.9 1.0 N G:GLY209 4.3 27.9 1.0 CE1 A:PHE527 4.4 22.5 1.0 C9 G:XVD501 4.4 30.3 1.0 CE2 A:PHE527 4.5 22.5 1.0 C4 G:XVD501 4.5 30.3 1.0 N G:LEU210 4.5 28.4 1.0 CA G:TYR206 4.6 29.5 1.0 O G:TYR206 4.7 29.5 1.0 C11 G:XVD501 4.7 30.3 1.0 CE1 G:TYR206 4.8 29.5 1.0 O G:PHE205 4.9 29.4 1.0 C10 G:XVD501 5.0 30.3 1.0 CG G:TYR206 5.0 29.5 1.0

Chlorine binding site 2 out of 2 in the The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Composite Lbd-Tmd Structure Combined From All Hippocampal Ampar Subtypes at 3.25 Angstrom Resolution within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl501 b:30.3 occ:1.00 CL1 H:XVD501 0.0 30.3 1.0 C1 H:XVD501 1.8 30.3 1.0 C2 H:XVD501 2.7 30.3 1.0 C6 H:XVD501 2.8 30.3 1.0 C7 H:XVD501 3.1 30.3 1.0 CA H:GLY209 3.4 27.6 1.0 C8 H:XVD501 3.4 30.3 1.0 CZ C:PHE527 3.7 22.3 1.0 C12 H:XVD501 3.8 30.3 1.0 C H:GLY209 3.9 27.6 1.0 C3 H:XVD501 4.0 30.3 1.0 C5 H:XVD501 4.0 30.3 1.0 CD1 H:TYR206 4.2 29.7 1.0 O H:GLY209 4.3 27.6 1.0 N H:GLY209 4.3 27.6 1.0 CE1 C:PHE527 4.4 22.3 1.0 C9 H:XVD501 4.4 30.3 1.0 CE2 C:PHE527 4.5 22.3 1.0 C4 H:XVD501 4.5 30.3 1.0 N H:LEU210 4.5 28.3 1.0 CA H:TYR206 4.6 29.7 1.0 O H:TYR206 4.7 29.7 1.0 C11 H:XVD501 4.7 30.3 1.0 CE1 H:TYR206 4.8 29.7 1.0 O H:PHE205 4.9 29.4 1.0 C10 H:XVD501 5.0 30.3 1.0 CG H:TYR206 5.0 29.7 1.0

J.Yu, P.Rao, S.Clark, J.Mitra, T.Ha, E.Gouaux. Hippocampal Ampa Receptor Assemblies and Mechanism of Allosteric Inhibition Nature 2021.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-021-03540-0