Chlorine in PDB 7los: Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65

Enzymatic activity of Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65

All present enzymatic activity of Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65:
3.4.19.12;

Protein crystallography data

The structure of Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65, PDB code: 7los was solved by K.M.Ratia, R.Xiong, G.R.Thatcher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.85 / 2.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 46.564, 146.184, 60.321, 90, 99.53, 90
R / Rfree (%) 20.9 / 29.3

Other elements in 7los:

The structure of Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65 (pdb code 7los). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65, PDB code: 7los:

Chlorine binding site 1 out of 1 in 7los

Go back to Chlorine Binding Sites List in 7los
Chlorine binding site 1 out of 1 in the Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl405

b:58.8
occ:1.00
NH1 B:ARG166 3.5 58.1 1.0
CZ B:ARG166 4.4 53.5 1.0
NH2 B:ARG166 4.4 53.2 1.0

Reference:

K.M.Ratia, R.Xiong, G.R.Thatcher. Potent, Novel Sars-Cov-2 Plpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures Biorxiv 2021.
Page generated: Tue Jul 30 00:08:30 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy