Chlorine in PDB 7lpk: Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112

Protein crystallography data

The structure of Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112, PDB code: 7lpk was solved by A.Chan, E.Schonbrunn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.38 / 1.39
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.42, 27.18, 76.91, 90, 93.66, 90
R / Rfree (%) 19 / 20.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112 (pdb code 7lpk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112, PDB code: 7lpk:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7lpk

Go back to Chlorine Binding Sites List in 7lpk
Chlorine binding site 1 out of 2 in the Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl3101

b:10.8
occ:1.00
CL01 A:Y9P3101 0.0 10.8 1.0
C03 A:Y9P3101 1.8 9.7 1.0
C04 A:Y9P3101 2.7 12.6 1.0
C02 A:Y9P3101 2.8 10.8 1.0
O01 A:Y9P3101 3.0 10.9 1.0
N03 A:Y9P3101 3.1 11.2 1.0
O A:PRO2951 3.3 8.8 1.0
CE1 A:PHE2952 3.6 7.1 1.0
O A:HOH3219 3.7 9.4 1.0
CD1 A:PHE2952 3.8 8.6 1.0
CB A:PRO2951 3.9 10.4 1.0
O A:HOH3224 3.9 13.3 1.0
N01 A:Y9P3101 4.0 11.7 1.0
C A:PRO2951 4.0 8.2 1.0
C01 A:Y9P3101 4.1 11.7 1.0
CG2 A:VAL2956 4.2 11.9 1.0
SG A:CYS3003 4.2 6.9 1.0
O A:HOH3247 4.3 11.0 1.0
CD1 A:PHE3013 4.4 9.2 1.0
CA A:PRO2951 4.5 9.3 1.0
CG A:PHE3013 4.5 8.3 1.0
CB A:PHE3013 4.5 7.6 1.0
N02 A:Y9P3101 4.5 16.8 1.0
C06 A:Y9P3101 4.6 11.1 1.0
CZ A:PHE2952 4.6 9.8 1.0
O A:HOH3234 4.6 12.4 1.0
CB A:CYS3003 4.8 5.4 1.0
CG A:PHE2952 4.9 7.3 1.0
N A:PHE2952 4.9 7.4 1.0

Chlorine binding site 2 out of 2 in 7lpk

Go back to Chlorine Binding Sites List in 7lpk
Chlorine binding site 2 out of 2 in the Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Bptf Bromodomain in Complex with Inhibitor Hz-03- 112 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl3101

b:11.3
occ:1.00
CL01 B:Y9P3101 0.0 11.3 1.0
C03 B:Y9P3101 1.8 10.0 1.0
C04 B:Y9P3101 2.8 11.8 1.0
C02 B:Y9P3101 2.8 10.8 1.0
O01 B:Y9P3101 3.0 10.3 1.0
N03 B:Y9P3101 3.1 11.3 1.0
O B:PRO2951 3.3 9.3 1.0
CE1 B:PHE2952 3.6 8.5 1.0
O B:HOH3218 3.6 8.0 1.0
CB B:PRO2951 3.7 12.6 1.0
CD1 B:PHE2952 3.8 8.5 1.0
O B:HOH3225 3.8 11.6 1.0
N01 B:Y9P3101 4.0 11.4 1.0
C B:PRO2951 4.0 8.3 1.0
CG2 B:VAL2956 4.1 12.3 1.0
C01 B:Y9P3101 4.1 9.5 1.0
SG B:CYS3003 4.2 7.4 1.0
O B:HOH3250 4.3 10.8 1.0
CA B:PRO2951 4.4 9.1 1.0
CG B:PHE3013 4.4 9.9 1.0
CD1 B:PHE3013 4.4 12.2 1.0
CB B:PHE3013 4.5 7.6 1.0
N02 B:Y9P3101 4.5 14.2 1.0
C06 B:Y9P3101 4.5 12.1 1.0
O B:HOH3251 4.5 12.7 1.0
CZ B:PHE2952 4.6 10.3 1.0
CB B:CYS3003 4.8 4.8 1.0
CG B:PHE2952 4.9 6.8 1.0
N B:PHE2952 5.0 8.3 1.0
CD2 B:PHE3013 5.0 11.7 1.0

Reference:

A.Chan, E.Schonbrunn, W.Pomerantz. Pyridazone Inhibitors of Bptf Bromodomain To Be Published.
Page generated: Tue Jul 30 00:08:50 2024

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