Chlorine in PDB 7lxb: Hela-Tubulin in Complex with Cryptophycin 52

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hela-Tubulin in Complex with Cryptophycin 52 (pdb code 7lxb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the Hela-Tubulin in Complex with Cryptophycin 52, PDB code: 7lxb:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Chlorine binding site 1 out of 8 in 7lxb

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Chlorine binding site 1 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1201

b:93.2
occ:1.00
 CL1 B:YGY1201 0.0 93.2 1.0
C31 B:YGY1201 1.8 93.2 1.0
C35 B:YGY1201 2.3 93.2 1.0
C32 B:YGY1201 2.7 93.2 1.0
C30 B:YGY1201 2.8 93.2 1.0
O8 B:YGY1201 3.0 93.2 1.0
CB A:CYS347 3.4 121.0 1.0
O A:MET313 3.6 115.5 1.0
CZ3 A:TRP346 3.7 118.6 1.0
C33 B:YGY1201 4.0 93.2 1.0
SG A:CYS347 4.1 121.0 1.0
C29 B:YGY1201 4.1 93.2 1.0
CH2 A:TRP346 4.2 118.6 1.0
C A:MET313 4.3 115.5 1.0
CE3 A:TRP346 4.4 118.6 1.0
O A:PRO348 4.5 111.4 1.0
CA A:MET313 4.5 115.5 1.0
C34 B:YGY1201 4.5 93.2 1.0
CB A:MET313 4.7 115.5 1.0
CA A:CYS347 4.7 121.0 1.0
O A:CYS347 4.7 121.0 1.0
C A:CYS347 4.9 121.0 1.0

Chlorine binding site 2 out of 8 in 7lxb

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Chlorine binding site 2 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1201

b:93.2
occ:1.00
 CL1 D:YGY1201 0.0 93.2 1.0
C31 D:YGY1201 1.8 93.2 1.0
C35 D:YGY1201 2.3 93.2 1.0
C32 D:YGY1201 2.7 93.2 1.0
C30 D:YGY1201 2.8 93.2 1.0
O8 D:YGY1201 3.0 93.2 1.0
CB C:CYS347 3.4 121.0 1.0
O C:MET313 3.6 115.5 1.0
CZ3 C:TRP346 3.7 118.6 1.0
C33 D:YGY1201 4.0 93.2 1.0
SG C:CYS347 4.1 121.0 1.0
C29 D:YGY1201 4.1 93.2 1.0
CH2 C:TRP346 4.2 118.6 1.0
C C:MET313 4.3 115.5 1.0
CE3 C:TRP346 4.4 118.6 1.0
O C:PRO348 4.5 111.4 1.0
CA C:MET313 4.5 115.5 1.0
C34 D:YGY1201 4.5 93.2 1.0
CB C:MET313 4.7 115.5 1.0
CA C:CYS347 4.7 121.0 1.0
O C:CYS347 4.7 121.0 1.0
C C:CYS347 4.9 121.0 1.0

Chlorine binding site 3 out of 8 in 7lxb

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Chlorine binding site 3 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl1201

b:93.2
occ:1.00
 CL1 F:YGY1201 0.0 93.2 1.0
C31 F:YGY1201 1.8 93.2 1.0
C35 F:YGY1201 2.3 93.2 1.0
C32 F:YGY1201 2.7 93.2 1.0
C30 F:YGY1201 2.8 93.2 1.0
O8 F:YGY1201 3.0 93.2 1.0
CB E:CYS347 3.4 121.0 1.0
O E:MET313 3.6 115.5 1.0
CZ3 E:TRP346 3.7 118.6 1.0
C33 F:YGY1201 4.0 93.2 1.0
SG E:CYS347 4.1 121.0 1.0
C29 F:YGY1201 4.1 93.2 1.0
CH2 E:TRP346 4.2 118.6 1.0
C E:MET313 4.3 115.5 1.0
CE3 E:TRP346 4.4 118.6 1.0
O E:PRO348 4.5 111.4 1.0
CA E:MET313 4.5 115.5 1.0
C34 F:YGY1201 4.5 93.2 1.0
CB E:MET313 4.7 115.5 1.0
CA E:CYS347 4.7 121.0 1.0
O E:CYS347 4.7 121.0 1.0
C E:CYS347 4.9 121.0 1.0

Chlorine binding site 4 out of 8 in 7lxb

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Chlorine binding site 4 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl1201

b:93.2
occ:1.00
 CL1 H:YGY1201 0.0 93.2 1.0
C31 H:YGY1201 1.8 93.2 1.0
C35 H:YGY1201 2.3 93.2 1.0
C32 H:YGY1201 2.7 93.2 1.0
C30 H:YGY1201 2.8 93.2 1.0
O8 H:YGY1201 3.0 93.2 1.0
CB G:CYS347 3.4 121.0 1.0
O G:MET313 3.6 115.5 1.0
CZ3 G:TRP346 3.7 118.6 1.0
C33 H:YGY1201 4.0 93.2 1.0
SG G:CYS347 4.1 121.0 1.0
C29 H:YGY1201 4.1 93.2 1.0
CH2 G:TRP346 4.2 118.6 1.0
C G:MET313 4.3 115.5 1.0
CE3 G:TRP346 4.4 118.6 1.0
O G:PRO348 4.5 111.4 1.0
CA G:MET313 4.5 115.5 1.0
C34 H:YGY1201 4.5 93.2 1.0
CB G:MET313 4.7 115.5 1.0
CA G:CYS347 4.7 121.0 1.0
O G:CYS347 4.7 121.0 1.0
C G:CYS347 4.9 121.0 1.0

Chlorine binding site 5 out of 8 in 7lxb

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Chlorine binding site 5 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Cl1201

b:93.2
occ:1.00
 CL1 J:YGY1201 0.0 93.2 1.0
C31 J:YGY1201 1.8 93.2 1.0
C35 J:YGY1201 2.3 93.2 1.0
C32 J:YGY1201 2.7 93.2 1.0
C30 J:YGY1201 2.8 93.2 1.0
O8 J:YGY1201 3.0 93.2 1.0
CB I:CYS347 3.4 121.0 1.0
O I:MET313 3.6 115.5 1.0
CZ3 I:TRP346 3.7 118.6 1.0
C33 J:YGY1201 4.0 93.2 1.0
SG I:CYS347 4.1 121.0 1.0
C29 J:YGY1201 4.1 93.2 1.0
CH2 I:TRP346 4.2 118.6 1.0
C I:MET313 4.3 115.5 1.0
CE3 I:TRP346 4.4 118.6 1.0
O I:PRO348 4.5 111.4 1.0
CA I:MET313 4.5 115.5 1.0
C34 J:YGY1201 4.5 93.2 1.0
CB I:MET313 4.7 115.5 1.0
CA I:CYS347 4.7 121.0 1.0
O I:CYS347 4.7 121.0 1.0
C I:CYS347 4.9 121.0 1.0

Chlorine binding site 6 out of 8 in 7lxb

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Chlorine binding site 6 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl1201

b:93.2
occ:1.00
 CL1 L:YGY1201 0.0 93.2 1.0
C31 L:YGY1201 1.8 93.2 1.0
C35 L:YGY1201 2.3 93.2 1.0
C32 L:YGY1201 2.7 93.2 1.0
C30 L:YGY1201 2.8 93.2 1.0
O8 L:YGY1201 3.0 93.2 1.0
CB K:CYS347 3.4 121.0 1.0
O K:MET313 3.6 115.5 1.0
CZ3 K:TRP346 3.7 118.6 1.0
C33 L:YGY1201 4.0 93.2 1.0
SG K:CYS347 4.1 121.0 1.0
C29 L:YGY1201 4.1 93.2 1.0
CH2 K:TRP346 4.2 118.6 1.0
C K:MET313 4.3 115.5 1.0
CE3 K:TRP346 4.4 118.6 1.0
O K:PRO348 4.5 111.4 1.0
CA K:MET313 4.5 115.5 1.0
C34 L:YGY1201 4.5 93.2 1.0
CB K:MET313 4.7 115.5 1.0
CA K:CYS347 4.7 121.0 1.0
O K:CYS347 4.7 121.0 1.0
C K:CYS347 4.9 121.0 1.0

Chlorine binding site 7 out of 8 in 7lxb

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Chlorine binding site 7 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Cl1201

b:93.2
occ:1.00
 CL1 N:YGY1201 0.0 93.2 1.0
C31 N:YGY1201 1.8 93.2 1.0
C35 N:YGY1201 2.3 93.2 1.0
C32 N:YGY1201 2.7 93.2 1.0
C30 N:YGY1201 2.8 93.2 1.0
O8 N:YGY1201 3.0 93.2 1.0
CB M:CYS347 3.4 121.0 1.0
O M:MET313 3.6 115.5 1.0
CZ3 M:TRP346 3.7 118.6 1.0
C33 N:YGY1201 4.0 93.2 1.0
SG M:CYS347 4.1 121.0 1.0
C29 N:YGY1201 4.1 93.2 1.0
CH2 M:TRP346 4.2 118.6 1.0
C M:MET313 4.3 115.5 1.0
CE3 M:TRP346 4.4 118.6 1.0
O M:PRO348 4.5 111.4 1.0
CA M:MET313 4.5 115.5 1.0
C34 N:YGY1201 4.5 93.2 1.0
CB M:MET313 4.7 115.5 1.0
CA M:CYS347 4.7 121.0 1.0
O M:CYS347 4.7 121.0 1.0
C M:CYS347 4.9 121.0 1.0

Chlorine binding site 8 out of 8 in 7lxb

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Chlorine binding site 8 out of 8 in the Hela-Tubulin in Complex with Cryptophycin 52


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Hela-Tubulin in Complex with Cryptophycin 52 within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Cl1201

b:93.2
occ:1.00
 CL1 P:YGY1201 0.0 93.2 1.0
C31 P:YGY1201 1.8 93.2 1.0
C35 P:YGY1201 2.3 93.2 1.0
C32 P:YGY1201 2.7 93.2 1.0
C30 P:YGY1201 2.8 93.2 1.0
O8 P:YGY1201 3.0 93.2 1.0
CB O:CYS347 3.4 121.0 1.0
O O:MET313 3.6 115.5 1.0
CZ3 O:TRP346 3.7 118.6 1.0
C33 P:YGY1201 4.0 93.2 1.0
SG O:CYS347 4.1 121.0 1.0
C29 P:YGY1201 4.1 93.2 1.0
CH2 O:TRP346 4.2 118.6 1.0
C O:MET313 4.3 115.5 1.0
CE3 O:TRP346 4.4 118.6 1.0
O O:PRO348 4.5 111.4 1.0
CA O:MET313 4.5 115.5 1.0
C34 P:YGY1201 4.5 93.2 1.0
CB O:MET313 4.7 115.5 1.0
CA O:CYS347 4.7 121.0 1.0
O O:CYS347 4.7 121.0 1.0
C O:CYS347 4.9 121.0 1.0

Reference:

E.Eren, N.R.Watts, D.L.Sackett, P.T.Wingfield. Conformational Changes in Tubulin Upon Binding Cryptophycin-52 Reveal Its Mechanism of Action J.Biol.Chem. 2021.
ISSN: ESSN 1083-351X
DOI: 10.1016/J.JBC.2021.101138
Page generated: Tue Jul 30 00:16:22 2024

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