Chlorine in PDB 7mne: PTP1B P206G Mutation, Open State
Enzymatic activity of PTP1B P206G Mutation, Open State
All present enzymatic activity of PTP1B P206G Mutation, Open State:
3.1.3.48;
Protein crystallography data
The structure of PTP1B P206G Mutation, Open State, PDB code: 7mne
was solved by
K.R.Torgeson,
R.Page,
W.Peti,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
38.16 /
1.60
|
Space group
|
P 32 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
88.123,
88.123,
72.377,
90,
90,
120
|
R / Rfree (%)
|
16.3 /
17.6
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the PTP1B P206G Mutation, Open State
(pdb code 7mne). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
PTP1B P206G Mutation, Open State, PDB code: 7mne:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 7mne
Go back to
Chlorine Binding Sites List in 7mne
Chlorine binding site 1 out
of 4 in the PTP1B P206G Mutation, Open State
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of PTP1B P206G Mutation, Open State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl401
b:31.5
occ:1.00
|
O
|
A:HOH592
|
3.0
|
26.0
|
1.0
|
N
|
A:VAL113
|
3.1
|
24.0
|
1.0
|
O
|
A:HOH640
|
3.1
|
26.8
|
1.0
|
CE1
|
A:HIS175
|
3.4
|
21.0
|
1.0
|
CA
|
A:ARG112
|
3.7
|
27.8
|
1.0
|
CB
|
A:VAL113
|
3.8
|
24.6
|
1.0
|
CG2
|
A:VAL113
|
3.9
|
22.8
|
1.0
|
C
|
A:ARG112
|
3.9
|
25.4
|
1.0
|
CB
|
A:ARG112
|
4.0
|
24.7
|
1.0
|
NE2
|
A:HIS175
|
4.0
|
18.6
|
1.0
|
O
|
A:HOH583
|
4.0
|
35.5
|
1.0
|
CA
|
A:VAL113
|
4.1
|
18.0
|
1.0
|
CG
|
A:ARG112
|
4.1
|
38.6
|
1.0
|
CH2
|
A:TRP125
|
4.4
|
16.6
|
1.0
|
O
|
A:HOH662
|
4.5
|
31.6
|
1.0
|
ND1
|
A:HIS175
|
4.5
|
17.6
|
1.0
|
CE
|
A:MET109
|
4.8
|
19.9
|
1.0
|
CZ2
|
A:TRP125
|
4.8
|
18.1
|
1.0
|
O
|
A:ASN111
|
4.9
|
21.9
|
1.0
|
N
|
A:ARG112
|
5.0
|
23.9
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 7mne
Go back to
Chlorine Binding Sites List in 7mne
Chlorine binding site 2 out
of 4 in the PTP1B P206G Mutation, Open State
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of PTP1B P206G Mutation, Open State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl402
b:34.4
occ:1.00
|
NH2
|
A:ARG254
|
3.1
|
20.0
|
1.0
|
NH1
|
A:ARG254
|
3.2
|
19.7
|
1.0
|
NE
|
A:ARG24
|
3.2
|
45.1
|
1.0
|
O
|
A:HOH551
|
3.2
|
29.1
|
1.0
|
O
|
A:HOH594
|
3.6
|
39.2
|
1.0
|
CZ
|
A:ARG254
|
3.6
|
19.1
|
1.0
|
CG
|
A:ARG24
|
3.7
|
26.0
|
1.0
|
CA
|
A:GLY259
|
3.8
|
16.7
|
1.0
|
OH
|
A:TYR20
|
3.9
|
24.6
|
1.0
|
CD
|
A:ARG24
|
3.9
|
34.4
|
1.0
|
CZ
|
A:ARG24
|
4.1
|
48.9
|
1.0
|
NH2
|
A:ARG24
|
4.1
|
54.6
|
1.0
|
O
|
A:GLY259
|
4.4
|
19.3
|
1.0
|
C
|
A:GLY259
|
4.5
|
18.1
|
1.0
|
CB
|
A:ARG24
|
4.6
|
28.2
|
1.0
|
N
|
A:GLY259
|
4.7
|
17.1
|
1.0
|
O
|
A:HOH604
|
4.7
|
18.0
|
1.0
|
O
|
A:ILE261
|
4.8
|
19.9
|
1.0
|
CZ
|
A:TYR20
|
4.8
|
19.6
|
1.0
|
NE
|
A:ARG254
|
4.9
|
18.8
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 7mne
Go back to
Chlorine Binding Sites List in 7mne
Chlorine binding site 3 out
of 4 in the PTP1B P206G Mutation, Open State
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of PTP1B P206G Mutation, Open State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl403
b:38.8
occ:1.00
|
NH2
|
A:ARG238
|
3.1
|
36.3
|
1.0
|
N
|
A:ASP245
|
3.2
|
30.1
|
1.0
|
NH1
|
A:ARG238
|
3.5
|
42.6
|
1.0
|
CB
|
A:ASP245
|
3.7
|
28.0
|
1.0
|
O
|
A:SER243
|
3.7
|
38.6
|
1.0
|
CZ
|
A:ARG238
|
3.7
|
37.0
|
1.0
|
O
|
A:ASP245
|
3.9
|
27.9
|
1.0
|
CA
|
A:VAL244
|
3.9
|
27.1
|
1.0
|
CA
|
A:ASP245
|
3.9
|
28.4
|
1.0
|
C
|
A:VAL244
|
4.1
|
32.9
|
1.0
|
CG2
|
A:VAL249
|
4.3
|
23.2
|
1.0
|
CB
|
A:LYS248
|
4.3
|
22.0
|
1.0
|
C
|
A:ASP245
|
4.4
|
26.9
|
1.0
|
CD
|
A:LYS248
|
4.4
|
40.0
|
1.0
|
C
|
A:SER243
|
4.6
|
39.3
|
1.0
|
CG1
|
A:VAL244
|
4.7
|
26.2
|
1.0
|
N
|
A:VAL244
|
4.8
|
31.5
|
1.0
|
CB
|
A:VAL244
|
4.9
|
27.8
|
1.0
|
CG
|
A:LYS248
|
4.9
|
31.0
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 7mne
Go back to
Chlorine Binding Sites List in 7mne
Chlorine binding site 4 out
of 4 in the PTP1B P206G Mutation, Open State
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of PTP1B P206G Mutation, Open State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl404
b:37.0
occ:1.00
|
NH2
|
A:ARG79
|
3.2
|
30.2
|
1.0
|
NH1
|
A:ARG79
|
3.3
|
26.2
|
1.0
|
CD
|
A:ARG199
|
3.7
|
20.5
|
1.0
|
CZ
|
A:ARG79
|
3.7
|
23.8
|
1.0
|
CG
|
A:ARG199
|
3.8
|
18.6
|
1.0
|
NE
|
A:ARG199
|
3.8
|
22.8
|
1.0
|
CB
|
A:ARG199
|
4.0
|
18.1
|
1.0
|
CZ
|
A:ARG199
|
4.1
|
25.2
|
1.0
|
NH1
|
A:ARG199
|
4.2
|
27.5
|
1.0
|
CD2
|
A:LEU233
|
4.3
|
30.3
|
1.0
|
NH2
|
A:ARG199
|
4.8
|
23.1
|
1.0
|
CA
|
A:ARG199
|
4.8
|
18.7
|
1.0
|
O
|
A:HOH570
|
4.9
|
22.6
|
1.0
|
O
|
A:HOH609
|
4.9
|
35.9
|
1.0
|
|
Reference:
K.R.Torgeson,
M.W.Clarkson,
D.Granata,
K.Lindorff-Larsen,
R.Page,
W.Peti.
Conserved Conformational Dynamics Determine Enzyme Activity. Sci Adv V. 8 O5546 2022.
ISSN: ESSN 2375-2548
PubMed: 35921420
DOI: 10.1126/SCIADV.ABO5546
Page generated: Tue Jul 30 00:35:13 2024
|