Chlorine in PDB 7mou: PTP1B F225Y-R199N-L195R
Enzymatic activity of PTP1B F225Y-R199N-L195R
All present enzymatic activity of PTP1B F225Y-R199N-L195R:
3.1.3.48;
Protein crystallography data
The structure of PTP1B F225Y-R199N-L195R, PDB code: 7mou
was solved by
K.R.Torgeson,
R.Page,
W.Peti,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
38.29 /
1.48
|
Space group
|
P 32 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
88.427,
88.427,
72.459,
90,
90,
120
|
R / Rfree (%)
|
17.2 /
18
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the PTP1B F225Y-R199N-L195R
(pdb code 7mou). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
PTP1B F225Y-R199N-L195R, PDB code: 7mou:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7mou
Go back to
Chlorine Binding Sites List in 7mou
Chlorine binding site 1 out
of 3 in the PTP1B F225Y-R199N-L195R
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of PTP1B F225Y-R199N-L195R within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:31.6
occ:1.00
|
NH2
|
A:ARG254
|
3.2
|
19.8
|
1.0
|
NH1
|
A:ARG254
|
3.2
|
20.5
|
1.0
|
NE
|
A:ARG24
|
3.3
|
34.4
|
1.0
|
NE2
|
A:GLN262
|
3.4
|
18.0
|
0.7
|
CZ
|
A:ARG254
|
3.6
|
17.4
|
1.0
|
O
|
A:HOH605
|
3.7
|
32.7
|
1.0
|
O
|
A:HOH570
|
3.8
|
33.2
|
1.0
|
CA
|
A:GLY259
|
3.8
|
16.1
|
1.0
|
CG
|
A:ARG24
|
3.9
|
27.1
|
1.0
|
OH
|
A:TYR20
|
4.0
|
23.6
|
1.0
|
CD
|
A:ARG24
|
4.0
|
33.5
|
1.0
|
NH2
|
A:ARG24
|
4.2
|
46.1
|
1.0
|
CZ
|
A:ARG24
|
4.2
|
43.6
|
1.0
|
C
|
A:GLY259
|
4.5
|
16.6
|
1.0
|
O
|
A:GLY259
|
4.5
|
16.3
|
1.0
|
N
|
A:GLY259
|
4.6
|
15.0
|
1.0
|
CB
|
A:ARG24
|
4.6
|
27.4
|
1.0
|
CD
|
A:GLN262
|
4.7
|
22.6
|
0.7
|
O
|
A:HOH520
|
4.7
|
17.3
|
1.0
|
O
|
A:ILE261
|
4.7
|
20.7
|
1.0
|
NE
|
A:ARG254
|
4.9
|
16.9
|
1.0
|
CZ
|
A:TYR20
|
4.9
|
22.0
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7mou
Go back to
Chlorine Binding Sites List in 7mou
Chlorine binding site 2 out
of 3 in the PTP1B F225Y-R199N-L195R
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of PTP1B F225Y-R199N-L195R within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl302
b:31.5
occ:1.00
|
NH2
|
A:ARG238
|
3.1
|
29.8
|
1.0
|
O3
|
A:GOL306
|
3.2
|
38.2
|
1.0
|
N
|
A:ASP245
|
3.2
|
24.7
|
1.0
|
NH1
|
A:ARG238
|
3.4
|
32.3
|
1.0
|
CB
|
A:ASP245
|
3.7
|
27.5
|
1.0
|
CZ
|
A:ARG238
|
3.7
|
34.5
|
1.0
|
O
|
A:SER243
|
3.8
|
33.3
|
1.0
|
O
|
A:ASP245
|
3.9
|
21.1
|
1.0
|
CA
|
A:ASP245
|
4.0
|
24.9
|
1.0
|
CA
|
A:VAL244
|
4.0
|
26.6
|
1.0
|
C3
|
A:GOL306
|
4.1
|
30.7
|
1.0
|
C
|
A:VAL244
|
4.1
|
28.2
|
1.0
|
CG2
|
A:VAL249
|
4.3
|
19.6
|
1.0
|
CB
|
A:LYS248
|
4.3
|
23.9
|
1.0
|
C
|
A:ASP245
|
4.4
|
22.9
|
1.0
|
CD
|
A:LYS248
|
4.5
|
31.6
|
1.0
|
C
|
A:SER243
|
4.7
|
32.5
|
1.0
|
C2
|
A:GOL306
|
4.8
|
41.6
|
1.0
|
CG1
|
A:VAL244
|
4.8
|
26.1
|
1.0
|
N
|
A:VAL244
|
4.9
|
29.3
|
1.0
|
CG
|
A:ASP245
|
5.0
|
28.9
|
1.0
|
CG
|
A:LYS248
|
5.0
|
26.0
|
1.0
|
CB
|
A:VAL244
|
5.0
|
27.3
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 7mou
Go back to
Chlorine Binding Sites List in 7mou
Chlorine binding site 3 out
of 3 in the PTP1B F225Y-R199N-L195R
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of PTP1B F225Y-R199N-L195R within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl303
b:26.5
occ:1.00
|
N
|
A:LYS39
|
3.3
|
16.6
|
1.0
|
CD
|
A:PRO38
|
3.6
|
17.8
|
1.0
|
CB
|
A:LYS39
|
3.6
|
21.5
|
1.0
|
CG
|
A:LYS39
|
3.6
|
22.5
|
1.0
|
N
|
A:PRO38
|
3.7
|
16.9
|
1.0
|
CB
|
A:LEU37
|
3.9
|
17.3
|
1.0
|
CD
|
A:LYS39
|
4.0
|
26.9
|
1.0
|
CA
|
A:LYS39
|
4.1
|
18.7
|
1.0
|
CB
|
A:PRO38
|
4.1
|
19.9
|
1.0
|
C
|
A:PRO38
|
4.2
|
19.2
|
1.0
|
CG
|
A:PRO38
|
4.2
|
22.8
|
1.0
|
CA
|
A:PRO38
|
4.3
|
17.6
|
1.0
|
C
|
A:LEU37
|
4.3
|
15.8
|
1.0
|
CD2
|
A:LEU37
|
4.3
|
20.4
|
1.0
|
CA
|
A:LEU37
|
4.5
|
16.1
|
1.0
|
CG
|
A:LEU37
|
4.6
|
17.4
|
1.0
|
CD1
|
A:LEU37
|
4.8
|
18.9
|
1.0
|
|
Reference:
K.R.Torgeson,
M.W.Clarkson,
D.Granata,
K.Lindorff-Larsen,
R.Page,
W.Peti.
Conserved Conformational Dynamics Determine Enzyme Activity. Sci Adv V. 8 O5546 2022.
ISSN: ESSN 2375-2548
PubMed: 35921420
DOI: 10.1126/SCIADV.ABO5546
Page generated: Tue Jul 30 00:35:35 2024
|