Chlorine in PDB 7mov: PTP1B 1-301 F225Y-R199N Mutations
Enzymatic activity of PTP1B 1-301 F225Y-R199N Mutations
All present enzymatic activity of PTP1B 1-301 F225Y-R199N Mutations:
3.1.3.48;
Protein crystallography data
The structure of PTP1B 1-301 F225Y-R199N Mutations, PDB code: 7mov
was solved by
K.R.Torgeson,
R.Page,
W.Peti,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
37.82 /
1.65
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
114.359,
90.102,
74.49,
90,
110.93,
90
|
R / Rfree (%)
|
16.5 /
19.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the PTP1B 1-301 F225Y-R199N Mutations
(pdb code 7mov). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
PTP1B 1-301 F225Y-R199N Mutations, PDB code: 7mov:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7mov
Go back to
Chlorine Binding Sites List in 7mov
Chlorine binding site 1 out
of 3 in the PTP1B 1-301 F225Y-R199N Mutations
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of PTP1B 1-301 F225Y-R199N Mutations within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl404
b:45.0
occ:1.00
|
NH2
|
A:ARG254
|
3.2
|
24.4
|
1.0
|
NH1
|
A:ARG254
|
3.2
|
24.6
|
1.0
|
NE2
|
A:GLN262
|
3.4
|
24.9
|
0.6
|
CZ
|
A:ARG254
|
3.6
|
25.7
|
1.0
|
NE
|
A:ARG24
|
3.6
|
53.8
|
1.0
|
O
|
A:HOH601
|
3.7
|
42.0
|
1.0
|
O
|
A:HOH723
|
3.8
|
47.7
|
1.0
|
O
|
A:HOH687
|
3.8
|
54.1
|
1.0
|
CA
|
A:GLY259
|
3.8
|
23.4
|
1.0
|
OH
|
A:TYR20
|
3.9
|
29.3
|
1.0
|
CG
|
A:ARG24
|
4.0
|
40.3
|
1.0
|
CD
|
A:ARG24
|
4.0
|
46.1
|
1.0
|
O
|
A:HOH697
|
4.3
|
57.6
|
1.0
|
CZ
|
A:ARG24
|
4.4
|
65.7
|
1.0
|
O
|
A:GLY259
|
4.5
|
22.6
|
1.0
|
C
|
A:GLY259
|
4.5
|
23.8
|
1.0
|
CB
|
A:ARG24
|
4.6
|
38.9
|
1.0
|
O
|
A:HOH629
|
4.7
|
21.7
|
1.0
|
N
|
A:GLY259
|
4.7
|
20.6
|
1.0
|
O
|
A:ILE261
|
4.7
|
27.2
|
1.0
|
CD
|
A:GLN262
|
4.7
|
26.1
|
0.6
|
NH2
|
A:ARG24
|
4.8
|
72.8
|
1.0
|
CZ
|
A:TYR20
|
4.8
|
31.5
|
1.0
|
NE
|
A:ARG254
|
4.9
|
21.9
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7mov
Go back to
Chlorine Binding Sites List in 7mov
Chlorine binding site 2 out
of 3 in the PTP1B 1-301 F225Y-R199N Mutations
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of PTP1B 1-301 F225Y-R199N Mutations within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl405
b:29.9
occ:1.00
|
OG
|
A:SER216
|
2.9
|
21.3
|
0.8
|
NZ
|
A:LYS120
|
3.1
|
30.9
|
1.0
|
O
|
A:HOH675
|
3.2
|
30.1
|
1.0
|
N
|
A:SER216
|
3.4
|
20.3
|
1.0
|
CB
|
A:SER216
|
3.5
|
22.1
|
0.8
|
NE
|
A:ARG221
|
3.6
|
20.9
|
1.0
|
CZ
|
A:ARG221
|
3.7
|
22.0
|
1.0
|
CB
|
A:CYS215
|
3.7
|
20.5
|
1.0
|
CE
|
A:LYS120
|
3.7
|
33.8
|
1.0
|
CD
|
A:LYS120
|
3.7
|
29.2
|
1.0
|
CB
|
A:SER216
|
3.7
|
23.1
|
0.2
|
CD
|
A:ARG221
|
3.7
|
18.7
|
1.0
|
NH1
|
A:ARG221
|
3.9
|
20.4
|
1.0
|
CA
|
A:SER216
|
4.1
|
21.9
|
0.8
|
NH2
|
A:ARG221
|
4.1
|
27.3
|
1.0
|
CA
|
A:SER216
|
4.1
|
21.9
|
0.2
|
CB
|
A:ASN111
|
4.2
|
19.5
|
1.0
|
C
|
A:CYS215
|
4.3
|
24.2
|
1.0
|
CG
|
A:ARG221
|
4.3
|
21.4
|
1.0
|
O
|
A:HOH515
|
4.4
|
40.4
|
1.0
|
SG
|
A:CYS215
|
4.4
|
20.9
|
1.0
|
O
|
A:HOH670
|
4.4
|
32.6
|
1.0
|
CA
|
A:CYS215
|
4.4
|
21.3
|
1.0
|
O
|
A:HOH580
|
4.7
|
41.1
|
1.0
|
O
|
A:HOH614
|
4.8
|
22.6
|
1.0
|
CG
|
A:ASN111
|
4.9
|
25.6
|
1.0
|
CB
|
A:ARG221
|
4.9
|
19.6
|
1.0
|
CG
|
A:LYS120
|
5.0
|
32.2
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 7mov
Go back to
Chlorine Binding Sites List in 7mov
Chlorine binding site 3 out
of 3 in the PTP1B 1-301 F225Y-R199N Mutations
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of PTP1B 1-301 F225Y-R199N Mutations within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl406
b:29.4
occ:1.00
|
N
|
A:LYS39
|
3.3
|
23.4
|
1.0
|
CD
|
A:PRO38
|
3.7
|
23.1
|
1.0
|
CB
|
A:LYS39
|
3.7
|
24.5
|
1.0
|
N
|
A:PRO38
|
3.8
|
22.8
|
1.0
|
CG
|
A:LYS39
|
3.8
|
25.1
|
1.0
|
CB
|
A:PRO38
|
3.9
|
27.4
|
1.0
|
CA
|
A:LYS39
|
4.1
|
22.5
|
1.0
|
CD
|
A:LYS39
|
4.1
|
31.0
|
1.0
|
CB
|
A:LEU37
|
4.2
|
20.9
|
1.0
|
C
|
A:PRO38
|
4.2
|
22.5
|
1.0
|
CA
|
A:PRO38
|
4.2
|
21.5
|
1.0
|
CG
|
A:PRO38
|
4.2
|
29.4
|
1.0
|
C
|
A:LEU37
|
4.4
|
20.6
|
1.0
|
CA
|
A:LEU37
|
4.7
|
22.7
|
1.0
|
CE
|
A:LYS39
|
4.8
|
37.3
|
1.0
|
CD2
|
A:LEU37
|
4.8
|
22.6
|
1.0
|
CG
|
A:LEU37
|
5.0
|
22.5
|
1.0
|
|
Reference:
K.R.Torgeson,
M.W.Clarkson,
D.Granata,
K.Lindorff-Larsen,
R.Page,
W.Peti.
Conserved Conformational Dynamics Determine Enzyme Activity. Sci Adv V. 8 O5546 2022.
ISSN: ESSN 2375-2548
PubMed: 35921420
DOI: 10.1126/SCIADV.ABO5546
Page generated: Tue Jul 30 00:36:13 2024
|