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Chlorine in PDB 7mrg: Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Nc-II-153

Protein crystallography data

The structure of Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Nc-II-153, PDB code: 7mrg was solved by A.Chan, E.Schonbrunn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.70 / 1.99
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 29.87, 66.62, 142.72, 90, 90, 90
R / Rfree (%) 22.4 / 27

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Nc-II-153 (pdb code 7mrg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Nc-II-153, PDB code: 7mrg:

Chlorine binding site 1 out of 1 in 7mrg

Go back to Chlorine Binding Sites List in 7mrg
Chlorine binding site 1 out of 1 in the Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Nc-II-153


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Nc-II-153 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:74.7
occ:1.00
OG B:SER28 3.3 64.5 1.0
N B:SER28 3.6 66.9 1.0
N B:ALA26 3.8 84.3 1.0
CB B:SER28 3.8 60.5 1.0
N B:ALA27 4.1 72.3 1.0
CA B:SER28 4.4 63.8 1.0
CB B:ALA27 4.4 70.4 1.0
C B:ALA27 4.6 66.7 1.0
CA B:ALA27 4.6 70.3 1.0
C B:ALA26 4.8 77.2 1.0
CA B:ALA26 4.9 79.4 1.0

Reference:

X.Guan, N.Cheryala, R.M.Karim, A.Chan, N.Berndt, J.Qi, G.I.Georg, E.Schonbrunn. Bivalent Bet Bromodomain Inhibitors Confer Increased Potency and Selectivity For Brdt Via Protein Conformational Plasticity. J.Med.Chem. V. 65 10441 2022.
ISSN: ISSN 0022-2623
PubMed: 35867655
DOI: 10.1021/ACS.JMEDCHEM.2C00453
Page generated: Tue Jul 30 00:39:13 2024

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