Chlorine in PDB 7n1o: The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone

Protein crystallography data

The structure of The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone, PDB code: 7n1o was solved by M.H.Mathis, B.D.Bezzant, D.T.Ramirez, S.D.Sarath Nawarathnage, T.Duokov, J.D.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.16 / 2.77
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 103.396, 103.396, 56.55, 90, 90, 120
R / Rfree (%) 20.3 / 22.8

Other elements in 7n1o:

The structure of The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone (pdb code 7n1o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone, PDB code: 7n1o:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7n1o

Go back to Chlorine Binding Sites List in 7n1o
Chlorine binding site 1 out of 2 in the The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:102.6
occ:1.00
OG A:SER94 2.8 95.2 1.0
O A:GLY156 3.5 101.1 1.0
OG1 A:THR158 3.8 87.0 1.0
MG A:MG301 3.8 88.8 1.0
CA A:GLU157 3.9 90.5 1.0
N A:SER94 4.1 89.7 1.0
OG A:SER92 4.1 76.6 1.0
CB A:SER94 4.1 89.9 1.0
CB A:SER92 4.1 81.2 1.0
C A:GLU157 4.2 87.5 1.0
N A:THR158 4.2 95.2 1.0
C A:GLY156 4.4 95.1 1.0
N A:GLY93 4.6 81.3 1.0
CA A:SER94 4.6 88.2 1.0
N A:GLU157 4.7 86.4 1.0
CB A:THR158 4.7 85.7 1.0
C A:GLY93 4.8 83.7 1.0
O A:GLU157 4.9 91.2 1.0
CB A:GLU157 4.9 92.0 1.0
CA A:GLY93 5.0 82.5 1.0

Chlorine binding site 2 out of 2 in 7n1o

Go back to Chlorine Binding Sites List in 7n1o
Chlorine binding site 2 out of 2 in the The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:86.5
occ:1.00
CG2 A:ILE14 3.5 60.5 1.0
CD2 A:LEU76 3.5 67.2 1.0
CD A:PRO13 3.5 57.9 1.0
CB A:GLN12 3.6 61.8 1.0
N A:ILE14 3.6 62.0 1.0
CB A:ILE14 3.7 62.9 1.0
CG A:GLN12 3.8 75.7 1.0
N A:PRO13 3.8 57.1 1.0
CA A:GLN12 4.0 61.4 1.0
C A:GLN12 4.1 61.5 1.0
NE2 A:GLN12 4.2 100.5 1.0
CD A:GLN12 4.3 86.8 1.0
CA A:ILE14 4.3 56.7 1.0
NE A:ARG80 4.4 84.0 1.0
C A:PRO13 4.6 65.2 1.0
CA A:PRO13 4.7 58.5 1.0
CG A:PRO13 4.8 51.2 1.0
CD1 A:LEU50 4.8 54.6 1.0
O A:GLN12 5.0 68.7 1.0
CB A:PRO13 5.0 52.1 1.0
CG1 A:ILE14 5.0 61.7 1.0

Reference:

S.D.Sarath Nawarathnage, S.Soleimani, M.H.Mathis, B.D.Bezzant, D.T.Ramirez, P.Gajjar, D.Bunn, C.Stewart, T.Smith, M.J.Pedroza Romo, S.Brown, T.Duokov, J.D.Moody. Telsam Polymers Accelerate Crystallization of Fused Target Proteins By Stabilizing Minimal Crystal Contacts and in the Absence of Direct Inter-Telsam Contacts To Be Published.
Page generated: Sat Jul 10 12:57:24 2021

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