Chlorine in PDB 7n8o: High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803

Enzymatic activity of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803

All present enzymatic activity of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803:
1.10.3.9;

Other elements in 7n8o:

The structure of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 also contains other interesting chemical elements:

Manganese (Mn) 8 atoms
Calcium (Ca) 8 atoms
Iron (Fe) 6 atoms
Magnesium (Mg) 70 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 (pdb code 7n8o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803, PDB code: 7n8o:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 7n8o

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Chlorine binding site 1 out of 4 in the High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:4.5
occ:1.00
 O A:HOH578 2.8 5.6 1.0
O D:HOH570 3.1 4.1 1.0
N A:GLU333 3.2 0.5 1.0
ND2 A:ASN181 3.5 1.2 1.0
CA A:HIS332 3.6 2.6 1.0
CB A:HIS332 3.8 2.6 1.0
O D:HOH562 3.8 30.0 1.0
C A:HIS332 3.9 2.6 1.0
CG A:GLU333 4.0 0.5 1.0
O A:HOH592 4.1 4.6 1.0
CD2 D:LEU321 4.2 5.5 1.0
CA A:GLU333 4.2 0.5 1.0
OD1 A:ASN181 4.2 1.2 1.0
CD D:LYS317 4.2 2.8 1.0
CE D:LYS317 4.2 2.8 1.0
CB D:LYS317 4.3 2.8 1.0
CG A:ASN181 4.3 1.2 1.0
CD1 D:LEU321 4.3 5.5 1.0
CG2 A:VAL185 4.3 1.1 1.0
CG D:LEU321 4.5 5.5 1.0
CG D:LYS317 4.6 2.8 1.0
CB A:GLU333 4.7 0.5 1.0
O A:HOH577 4.8 5.3 1.0
CG A:HIS332 4.9 2.6 1.0
O D:LYS317 4.9 2.8 1.0
N A:HIS332 4.9 2.6 1.0
OE2 A:GLU333 5.0 0.5 1.0

Chlorine binding site 2 out of 4 in 7n8o

Go back to Chlorine Binding Sites List in 7n8o
Chlorine binding site 2 out of 4 in the High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:2.0
occ:1.00
 O C:HOH681 2.9 3.4 1.0
N A:ASN338 3.1 3.4 1.0
O A:HOH587 3.3 4.3 1.0
N C:GLU341 3.4 1.2 1.0
CD2 A:PHE339 3.5 2.2 1.0
N A:PHE339 3.7 2.2 1.0
CA A:HIS337 3.8 2.0 1.0
CA C:GLY340 3.9 3.3 1.0
CA A:ASN338 3.9 3.4 1.0
CB A:ASN338 3.9 3.4 1.0
C A:HIS337 3.9 2.0 1.0
CB C:GLU341 4.1 1.2 1.0
C C:GLY340 4.2 3.3 1.0
CE2 A:PHE339 4.2 2.2 1.0
O A:ALA336 4.2 4.1 1.0
C A:ASN338 4.2 3.4 1.0
CG A:PHE339 4.3 2.2 1.0
O C:HOH680 4.3 4.3 1.0
CB A:PHE339 4.3 2.2 1.0
CA C:GLU341 4.4 1.2 1.0
CG C:GLU341 4.4 1.2 1.0
CB A:HIS337 4.4 2.0 1.0
CA A:PHE339 4.5 2.2 1.0
O C:HOH651 4.6 4.5 1.0
O C:HOH657 4.6 5.0 1.0
O A:PHE339 4.7 2.2 1.0
N C:THR342 4.8 0.9 1.0
N A:HIS337 4.9 2.0 1.0
CD2 A:HIS337 4.9 2.0 1.0
CG A:ASN338 4.9 3.4 1.0
NE2 C:GLN300 5.0 1.6 1.0
C A:ALA336 5.0 4.1 1.0

Chlorine binding site 3 out of 4 in 7n8o

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Chlorine binding site 3 out of 4 in the High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Cl403

b:4.5
occ:1.00
 O a:HOH578 2.8 5.6 1.0
O d:HOH570 3.1 4.1 1.0
N a:GLU333 3.2 0.5 1.0
ND2 a:ASN181 3.5 1.2 1.0
CA a:HIS332 3.6 2.6 1.0
CB a:HIS332 3.8 2.6 1.0
O d:HOH562 3.8 30.0 1.0
C a:HIS332 3.9 2.6 1.0
CG a:GLU333 4.0 0.5 1.0
O a:HOH592 4.1 4.6 1.0
CD2 d:LEU321 4.2 5.5 1.0
CA a:GLU333 4.2 0.5 1.0
OD1 a:ASN181 4.2 1.2 1.0
CD d:LYS317 4.2 2.8 1.0
CE d:LYS317 4.2 2.8 1.0
CB d:LYS317 4.3 2.8 1.0
CG a:ASN181 4.3 1.2 1.0
CD1 d:LEU321 4.3 5.5 1.0
CG2 a:VAL185 4.3 1.1 1.0
CG d:LEU321 4.5 5.5 1.0
CG d:LYS317 4.6 2.8 1.0
CB a:GLU333 4.7 0.5 1.0
O a:HOH577 4.8 5.3 1.0
CG a:HIS332 4.9 2.6 1.0
O d:LYS317 4.9 2.8 1.0
N a:HIS332 4.9 2.6 1.0
OE2 a:GLU333 5.0 0.5 1.0

Chlorine binding site 4 out of 4 in 7n8o

Go back to Chlorine Binding Sites List in 7n8o
Chlorine binding site 4 out of 4 in the High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Cl404

b:2.0
occ:1.00
 O c:HOH682 2.9 3.4 1.0
N a:ASN338 3.1 3.4 1.0
O a:HOH587 3.3 4.3 1.0
N c:GLU341 3.4 1.2 1.0
CD2 a:PHE339 3.5 2.2 1.0
N a:PHE339 3.7 2.2 1.0
CA a:HIS337 3.8 2.0 1.0
CA c:GLY340 3.9 3.3 1.0
CA a:ASN338 3.9 3.4 1.0
CB a:ASN338 3.9 3.4 1.0
C a:HIS337 3.9 2.0 1.0
CB c:GLU341 4.1 1.2 1.0
C c:GLY340 4.2 3.3 1.0
CE2 a:PHE339 4.2 2.2 1.0
O a:ALA336 4.2 4.1 1.0
C a:ASN338 4.2 3.4 1.0
CG a:PHE339 4.3 2.2 1.0
CB a:PHE339 4.3 2.2 1.0
O c:HOH680 4.3 4.3 1.0
CA c:GLU341 4.4 1.2 1.0
CG c:GLU341 4.4 1.2 1.0
CB a:HIS337 4.4 2.0 1.0
CA a:PHE339 4.5 2.2 1.0
O c:HOH651 4.6 4.5 1.0
O c:HOH657 4.6 5.0 1.0
O a:PHE339 4.7 2.2 1.0
N c:THR342 4.8 0.9 1.0
N a:HIS337 4.9 2.0 1.0
CD2 a:HIS337 4.9 2.0 1.0
CG a:ASN338 4.9 3.4 1.0
NE2 c:GLN300 5.0 1.6 1.0
C a:ALA336 5.0 4.1 1.0

Reference:

C.J.Gisriel, J.Wang, J.Liu, D.A.Flesher, K.M.Reiss, H.Huang, K.R.Yang, W.H.Armstrong, M.R.Gunner, V.S.Batista, R.J.Debus, G.W.Brudvig. High-Resolution Cryo-Em Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803 To Be Published.
Page generated: Tue Jul 30 00:47:08 2024

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