Chlorine in PDB 7nea: Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).

Enzymatic activity of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).

All present enzymatic activity of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).:
2.6.1.42;

Protein crystallography data

The structure of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant)., PDB code: 7nea was solved by K.M.Boyko, T.Petrova, A.Y.Nikolaeva, Y.S.Zeifman, T.V.Rakitina, D.A.Suplatov, V.O.Popov, E.Y.Bezsudnova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 95.13 / 2.00
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 146.497, 146.497, 143.776, 90, 90, 120
R / Rfree (%) 16.1 / 20.1

Other elements in 7nea:

The structure of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant). also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant). (pdb code 7nea). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant)., PDB code: 7nea:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7nea

Go back to Chlorine Binding Sites List in 7nea
Chlorine binding site 1 out of 3 in the Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:33.2
occ:1.00
NH2 A:ARG92 3.3 31.2 1.0
NE2 A:GLN85 3.3 28.4 1.0
NH1 A:ARG92 4.0 32.1 1.0
CZ A:ARG92 4.1 30.9 1.0
CG2 A:ILE88 4.2 25.5 1.0
CD A:GLN85 4.3 28.9 1.0
OE1 A:GLN85 4.5 30.1 1.0
OD1 A:ASP89 4.6 29.2 1.0

Chlorine binding site 2 out of 3 in 7nea

Go back to Chlorine Binding Sites List in 7nea
Chlorine binding site 2 out of 3 in the Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:57.1
occ:1.00
O A:HOH579 2.7 50.9 1.0
NH1 A:ARG232 3.2 38.5 1.0
CD A:ARG232 3.6 39.1 1.0
CE1 A:HIS229 3.6 57.7 1.0
NE2 A:HIS229 3.6 55.4 1.0
ND1 A:HIS229 3.8 54.7 1.0
CD2 A:HIS229 3.8 54.2 1.0
CG A:HIS229 3.9 48.5 1.0
CG2 A:ILE228 4.0 31.6 1.0
CA A:HIS229 4.1 35.2 1.0
CZ A:ARG232 4.2 39.7 1.0
NE A:ARG232 4.3 39.9 1.0
N A:HIS229 4.3 34.2 1.0
OE2 A:GLU233 4.4 48.7 1.0
C A:ILE228 4.5 33.7 1.0
O A:ILE228 4.6 33.8 1.0
CG A:ARG232 4.6 38.0 1.0
CB A:HIS229 4.7 40.4 1.0
CB A:ARG232 4.7 38.1 1.0
CB A:ILE228 5.0 31.2 1.0

Chlorine binding site 3 out of 3 in 7nea

Go back to Chlorine Binding Sites List in 7nea
Chlorine binding site 3 out of 3 in the Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl408

b:42.7
occ:1.00
O A:HOH665 2.8 44.4 1.0
O A:HOH632 2.9 20.1 0.5
O A:ASP29 3.1 31.2 0.5
N A:ALA33 3.3 25.8 1.0
CA A:TYR30 3.3 23.6 0.5
N A:TYR30 3.4 22.6 0.5
C A:TYR30 3.7 25.4 0.5
CB A:ALA33 3.8 26.9 1.0
N A:TRP32 3.8 27.6 1.0
O A:HOH707 3.9 40.3 1.0
CB A:TRP32 3.9 34.6 1.0
CA A:TYR30 4.0 27.6 0.5
C A:TRP32 4.1 29.4 1.0
O A:TYR30 4.1 24.2 0.5
CA A:TRP32 4.1 30.5 1.0
CA A:ALA33 4.1 28.0 1.0
C A:ASP29 4.2 27.9 0.5
N A:TRP31 4.2 26.2 1.0
C A:TYR30 4.2 26.8 0.5
CD1 A:TYR30 4.4 23.2 0.5
N A:TYR30 4.5 26.6 0.5
CG1 A:VAL109 4.5 45.1 1.0
CB A:TYR30 4.6 23.4 0.5
C A:ASP29 4.7 23.4 0.5
C A:TRP31 4.7 26.9 1.0
O A:TYR30 4.9 24.4 0.5
CG A:TRP32 5.0 44.4 1.0

Reference:

E.Y.Bezsudnova, K.M.Boyko, T.Petrova, A.Y.Nikolaeva, Y.S.Zeifman, T.V.Rakitina, D.A.Suplatov, V.O.Popov. Crystal Structure of Branched-Chain Amino Acid Aminotransferase From Thermobaculum Terrenum (M3 Mutant). To Be Published.
Page generated: Sat Jul 10 13:01:59 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy