Chlorine in PDB 7nhw: Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone
Protein crystallography data
The structure of Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone, PDB code: 7nhw
was solved by
M.Gardonyi,
A.Heine,
G.Klebe,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
26.87 /
1.92
|
Space group
|
P 32 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
57.515,
57.515,
159.526,
90,
90,
120
|
R / Rfree (%)
|
19.1 /
23.7
|
Other elements in 7nhw:
The structure of Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone
(pdb code 7nhw). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone, PDB code: 7nhw:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7nhw
Go back to
Chlorine Binding Sites List in 7nhw
Chlorine binding site 1 out
of 3 in the Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:46.7
occ:1.00
|
N
|
A:LEU121
|
3.2
|
37.8
|
1.0
|
O
|
A:HOH367
|
3.2
|
64.6
|
1.0
|
C
|
A:ALA119
|
3.3
|
37.9
|
1.0
|
CA
|
A:ALA119
|
3.4
|
33.0
|
1.0
|
CB
|
A:LEU121
|
3.4
|
37.1
|
1.0
|
N
|
A:LYS122
|
3.5
|
35.1
|
1.0
|
N
|
A:PRO120
|
3.6
|
36.8
|
1.0
|
CA
|
A:LEU121
|
3.7
|
34.2
|
1.0
|
CB
|
A:ALA119
|
3.7
|
31.2
|
1.0
|
O
|
A:ALA119
|
3.7
|
32.5
|
1.0
|
CD
|
A:PRO120
|
3.9
|
38.4
|
1.0
|
CG
|
A:LEU121
|
4.0
|
43.6
|
1.0
|
CG
|
A:LYS122
|
4.0
|
37.7
|
1.0
|
C
|
A:LEU121
|
4.1
|
33.9
|
1.0
|
C
|
A:PRO120
|
4.2
|
36.3
|
1.0
|
CD1
|
A:LEU121
|
4.5
|
50.1
|
1.0
|
CA
|
A:PRO120
|
4.5
|
34.3
|
1.0
|
CB
|
A:LYS122
|
4.6
|
32.1
|
1.0
|
CG
|
A:PRO120
|
4.6
|
33.5
|
1.0
|
CA
|
A:LYS122
|
4.6
|
36.2
|
1.0
|
CE
|
A:LYS122
|
4.6
|
50.9
|
1.0
|
CD
|
A:LYS122
|
4.7
|
44.3
|
1.0
|
N
|
A:ALA119
|
4.7
|
38.3
|
1.0
|
O
|
A:LYS118
|
4.9
|
37.9
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7nhw
Go back to
Chlorine Binding Sites List in 7nhw
Chlorine binding site 2 out
of 3 in the Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl202
b:45.4
occ:0.85
|
CL1
|
A:CLW202
|
0.0
|
45.4
|
0.8
|
C6
|
A:CLW202
|
1.7
|
46.3
|
0.8
|
C5
|
A:CLW202
|
2.7
|
42.3
|
0.8
|
C1
|
A:CLW202
|
2.7
|
47.7
|
0.8
|
CA
|
B:ALA94
|
3.5
|
26.8
|
1.0
|
CG2
|
B:VAL107
|
3.7
|
26.5
|
1.0
|
CB
|
B:PHE97
|
3.8
|
22.4
|
1.0
|
OG1
|
B:THR110
|
3.8
|
25.8
|
1.0
|
C4
|
A:CLW202
|
4.0
|
49.2
|
0.8
|
CB
|
B:ALA94
|
4.0
|
29.4
|
1.0
|
C2
|
A:CLW202
|
4.0
|
42.9
|
0.8
|
N
|
B:ALA94
|
4.0
|
25.9
|
1.0
|
O
|
B:TYR93
|
4.0
|
28.0
|
1.0
|
CA
|
B:VAL107
|
4.1
|
26.3
|
1.0
|
CG
|
B:PHE97
|
4.2
|
25.3
|
1.0
|
C
|
B:TYR93
|
4.2
|
26.7
|
1.0
|
O
|
B:PRO106
|
4.4
|
28.1
|
1.0
|
CD1
|
B:PHE97
|
4.4
|
28.3
|
1.0
|
N
|
B:VAL107
|
4.4
|
28.9
|
1.0
|
CB
|
B:VAL107
|
4.4
|
28.5
|
1.0
|
CB
|
B:THR110
|
4.4
|
33.6
|
1.0
|
C3
|
A:CLW202
|
4.5
|
50.7
|
0.8
|
C
|
B:PRO106
|
4.5
|
30.4
|
1.0
|
C
|
B:ALA94
|
4.6
|
24.0
|
1.0
|
O
|
B:ALA94
|
4.6
|
28.2
|
1.0
|
CG2
|
B:THR110
|
4.8
|
32.3
|
1.0
|
CG1
|
B:VAL107
|
4.9
|
31.3
|
1.0
|
CE1
|
A:PHE97
|
5.0
|
32.0
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 7nhw
Go back to
Chlorine Binding Sites List in 7nhw
Chlorine binding site 3 out
of 3 in the Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl202
b:40.0
occ:1.00
|
O
|
B:HOH357
|
3.0
|
35.9
|
1.0
|
N
|
B:GLY9
|
3.2
|
41.0
|
1.0
|
O
|
B:HOH363
|
3.2
|
45.7
|
1.0
|
N
|
B:SER12
|
3.2
|
27.9
|
1.0
|
CA
|
B:GLY9
|
3.3
|
39.1
|
1.0
|
C
|
B:GLY9
|
3.4
|
38.3
|
1.0
|
N
|
B:ILE11
|
3.4
|
29.2
|
1.0
|
OG
|
B:SER12
|
3.6
|
43.7
|
1.0
|
CB
|
B:ILE11
|
3.7
|
32.0
|
1.0
|
O
|
B:GLY9
|
3.8
|
32.2
|
1.0
|
N
|
B:SER10
|
3.8
|
32.8
|
0.3
|
N
|
B:SER10
|
3.8
|
32.1
|
0.7
|
CA
|
B:ILE11
|
3.9
|
30.2
|
1.0
|
CB
|
B:SER12
|
3.9
|
41.9
|
1.0
|
CZ
|
A:PHE67
|
4.0
|
49.3
|
1.0
|
C
|
B:ILE11
|
4.0
|
29.9
|
1.0
|
CE2
|
A:PHE67
|
4.0
|
46.1
|
1.0
|
CA
|
B:SER12
|
4.2
|
33.8
|
1.0
|
C
|
B:SER10
|
4.4
|
34.0
|
0.7
|
C
|
B:SER10
|
4.4
|
33.9
|
0.3
|
CG1
|
B:ILE11
|
4.4
|
34.7
|
1.0
|
CG2
|
B:ILE11
|
4.7
|
32.7
|
1.0
|
CA
|
B:SER10
|
4.7
|
34.1
|
0.3
|
CA
|
B:SER10
|
4.7
|
33.8
|
0.7
|
O
|
B:HOH306
|
4.8
|
30.6
|
1.0
|
O
|
B:HOH337
|
4.8
|
29.8
|
1.0
|
O
|
B:HOH302
|
4.9
|
36.4
|
1.0
|
CD1
|
B:ILE11
|
5.0
|
30.6
|
1.0
|
|
Reference:
M.Gardonyi,
A.Heine,
G.Klebe.
Crystal Structure of A Shortened Ipgc Variant in Complex with Chlorzoxazone To Be Published.
Page generated: Tue Jul 30 00:53:35 2024
|