Chlorine in PDB 7o5y: Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili

Protein crystallography data

The structure of Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili, PDB code: 7o5y was solved by D.Sheppard, V.Pelicic, J.B.Berry, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.92 / 1.77
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 93.32, 93.32, 181.13, 90, 90, 90
R / Rfree (%) 20.6 / 23.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili (pdb code 7o5y). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili, PDB code: 7o5y:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7o5y

Go back to Chlorine Binding Sites List in 7o5y
Chlorine binding site 1 out of 2 in the Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:47.1
occ:1.00
O C:HOH356 3.1 43.6 1.0
CG2 C:THR15 3.2 32.1 1.0
N C:THR15 3.3 32.8 1.0
N C:GLN14 3.5 33.9 1.0
OG1 C:THR15 3.7 50.1 1.0
CB C:THR15 3.9 36.5 1.0
CB C:SER13 4.0 42.0 1.0
OG C:SER13 4.0 39.8 1.0
CA C:GLN14 4.1 30.5 1.0
CB C:GLN14 4.1 31.9 1.0
C C:GLN14 4.1 32.0 1.0
CD B:LYS126 4.2 40.6 1.0
CA C:THR15 4.2 33.6 1.0
C C:SER13 4.3 34.2 1.0
CA C:SER13 4.5 41.4 1.0
O B:HOH231 4.7 42.8 1.0
CB B:LYS126 4.8 30.1 1.0

Chlorine binding site 2 out of 2 in 7o5y

Go back to Chlorine Binding Sites List in 7o5y
Chlorine binding site 2 out of 2 in the Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pila Minor Pilin of Streptococcus Sanguinis Type IV Pili within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl201

b:57.9
occ:1.00
O D:HOH381 2.1 61.8 1.0
O D:HOH319 2.9 41.7 1.0
OD2 D:ASP124 3.0 49.0 1.0
OE1 D:GLU96 3.1 56.9 1.0
CG2 D:THR125 3.3 46.5 1.0
CD D:GLU96 3.8 60.7 1.0
CG D:GLU96 4.0 50.5 1.0
CG D:ASP124 4.0 48.1 1.0
CB D:GLU96 4.2 42.9 1.0
CB D:ASP124 4.3 41.5 1.0
OD1 D:ASN122 4.5 38.2 1.0
CA D:GLU96 4.7 38.1 1.0
CB D:THR125 4.8 43.7 1.0
OE2 D:GLU96 4.8 60.2 1.0
O D:GLU96 4.9 35.7 1.0
NH2 D:ARG129 5.0 37.9 1.0

Reference:

D.Sheppard, V.Pelicic, J.B.Berry. Structure of Pila, Minor Pilin From Type IV Pili in Streptococcus Sanguinis To Be Published.
Page generated: Tue Apr 4 20:58:13 2023

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