Chlorine in PDB 7oct: Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii

Protein crystallography data

The structure of Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii, PDB code: 7oct was solved by H.K.Tam, V.Mueller, K.M.Pos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.43 / 2.85
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 99.304, 156.957, 220.028, 90, 90, 90
R / Rfree (%) 22.7 / 27.8

Other elements in 7oct:

The structure of Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii also contains other interesting chemical elements:

Potassium (K) 1 atom
Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii (pdb code 7oct). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii, PDB code: 7oct:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7oct

Go back to Chlorine Binding Sites List in 7oct
Chlorine binding site 1 out of 2 in the Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl808

b:64.1
occ:1.00
O A:HOH928 3.0 44.3 1.0
N A:GLN244 3.1 49.9 1.0
N A:GLY99 3.1 47.1 1.0
CA A:GLY99 3.4 45.9 1.0
NE2 A:GLN102 3.5 44.7 1.0
CB A:GLN244 3.6 51.2 1.0
CG A:GLN244 3.6 50.9 1.0
CB A:ASN243 3.7 47.8 1.0
CA A:ASN243 3.8 48.5 1.0
C A:ASN243 3.9 49.9 1.0
CA A:GLN244 3.9 51.1 1.0
CG A:GLN102 4.0 43.9 1.0
CD A:GLN244 4.1 51.0 1.0
C A:LYS98 4.2 48.1 1.0
NE2 A:GLN244 4.2 50.2 1.0
C A:GLY99 4.2 45.1 1.0
CD A:GLN102 4.2 43.9 1.0
CA A:LYS98 4.5 49.8 1.0
CE1 A:TYR216 4.6 46.8 1.0
N A:LEU100 4.6 45.3 1.0
CG A:LYS98 4.7 51.0 1.0
C A:GLN244 4.8 51.5 1.0
OE1 A:GLN244 4.8 52.0 1.0
CG A:ASN243 4.8 48.2 1.0
N A:LEU245 4.8 50.8 1.0
CB A:GLN102 5.0 43.2 1.0
O A:GLY99 5.0 44.4 1.0

Chlorine binding site 2 out of 2 in 7oct

Go back to Chlorine Binding Sites List in 7oct
Chlorine binding site 2 out of 2 in the Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Nadph Bound to the Dehydrogenase Domain of the Bifunctional Mannitol- 1-Phosphate Dehydrogenase/Phosphatase Mtld-N374A From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1211

b:55.6
occ:1.00
NE B:ARG431 3.3 74.3 1.0
O B:HOH1318 3.4 46.1 1.0
NH1 B:ARG431 3.4 72.1 1.0
CG B:ARG428 3.6 67.3 1.0
CZ B:ARG431 3.8 73.7 1.0
CB B:ARG428 3.8 67.1 1.0
CA B:ARG428 3.9 68.4 1.0
CD2 B:TYR427 4.2 75.2 1.0
CE2 B:TYR427 4.2 77.3 1.0
CD B:ARG431 4.4 76.2 1.0
O B:HOH1323 4.5 49.0 1.0
N B:ARG428 4.5 68.9 1.0

Reference:

H.K.Tam, P.Konig, S.Himpich, N.D.Ngu, R.Abele, V.Muller, K.M.Pos. Unidirectional Mannitol Synthesis of Acinetobacter Baumannii Mtld Is Facilitated By the Helix-Loop-Helix-Mediated Dimer Formation. Proc.Natl.Acad.Sci.Usa V. 119 94119 2022.
ISSN: ESSN 1091-6490
PubMed: 35363566
DOI: 10.1073/PNAS.2107994119
Page generated: Tue Apr 4 20:59:17 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy