Chlorine in PDB 7oxh: Ttslyd with Pseudo-Wild-Type S2 Peptide

Enzymatic activity of Ttslyd with Pseudo-Wild-Type S2 Peptide

All present enzymatic activity of Ttslyd with Pseudo-Wild-Type S2 Peptide:
5.2.1.8;

Protein crystallography data

The structure of Ttslyd with Pseudo-Wild-Type S2 Peptide, PDB code: 7oxh was solved by S.Pazicky, J.Lei, C.Loew, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.63 / 1.70
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 49.225, 49.225, 131.214, 90, 90, 120
R / Rfree (%) 20.3 / 23.8

Other elements in 7oxh:

The structure of Ttslyd with Pseudo-Wild-Type S2 Peptide also contains other interesting chemical elements:

Nickel (Ni) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ttslyd with Pseudo-Wild-Type S2 Peptide (pdb code 7oxh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Ttslyd with Pseudo-Wild-Type S2 Peptide, PDB code: 7oxh:

Chlorine binding site 1 out of 1 in 7oxh

Go back to Chlorine Binding Sites List in 7oxh
Chlorine binding site 1 out of 1 in the Ttslyd with Pseudo-Wild-Type S2 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ttslyd with Pseudo-Wild-Type S2 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl207

b:52.6
occ:1.00
OG A:SER151 2.8 98.8 1.0
N A:ALA148 3.2 75.9 1.0
CB A:SER151 3.3 99.0 1.0
N A:LEU30 3.5 44.7 1.0
ND2 A:ASN35 3.6 70.8 1.0
CB A:HIS147 3.6 84.1 1.0
CA A:HIS147 3.7 79.2 1.0
CA A:TYR29 3.7 40.2 1.0
C A:HIS147 3.9 78.1 1.0
CG A:ASN35 4.0 66.1 1.0
C A:TYR29 4.1 42.9 1.0
CB A:ALA148 4.1 74.0 1.0
CB A:ASN35 4.2 51.8 1.0
CA A:ALA148 4.2 76.3 1.0
O A:SER28 4.2 41.1 1.0
CB A:TYR29 4.2 40.5 1.0
ND1 A:HIS147 4.3 96.3 1.0
CG A:HIS147 4.4 95.5 1.0
CB A:LEU30 4.4 44.5 1.0
CA A:SER151 4.5 98.8 1.0
CA A:LEU30 4.6 42.9 1.0
O A:ALA148 4.7 93.9 1.0
N A:TYR29 4.7 39.4 1.0
OD1 A:ASN35 4.8 75.2 1.0
C A:SER28 4.9 47.7 1.0
CD1 B:LEU9 4.9 62.3 1.0
C A:ALA148 5.0 80.5 1.0
O A:GLY146 5.0 78.6 1.0

Reference:

S.Pazicky, A.A.Werle, J.Lei, C.Low, U.Weininger. Impact of Distant Peptide Substrate Residues on Enzymatic Activity of Slyd. Cell.Mol.Life Sci. V. 79 138 2022.
ISSN: ESSN 1420-9071
PubMed: 35184231
DOI: 10.1007/S00018-022-04179-4
Page generated: Tue Jul 30 02:10:33 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy