Chlorine in PDB 7p19: Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2

The structure of Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2, PDB code: 7p19 was solved by E.Erausquin, J.Lopez-Sagaseta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	93.99 / 3.24
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	60.591, 165.037, 228.678, 90, 90, 90
R / Rfree (%)	23.1 / 28.9

The structure of Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2 also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Chlorine atom in the Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2 (pdb code 7p19). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2, PDB code: 7p19:

Chlorine binding site 1 out of 1 in the Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sars-Cov-2 Rbd Q498Y Complexed with Human ACE2 within 5.0Å range: probe atom residue distance (Å) B Occ E:Cl602 b:97.6 occ:1.00 O E:VAL401 2.9 76.7 1.0 O E:LEU452 2.9 74.2 1.0 N E:VAL350 3.2 75.6 1.0 CB E:TYR451 3.3 65.6 1.0 CA E:SER349 3.3 71.0 1.0 N E:LEU452 3.6 75.2 1.0 CD2 E:TYR495 3.6 81.4 1.0 CE2 E:TYR495 3.7 89.5 1.0 C E:SER349 3.8 75.3 1.0 CB E:SER349 3.8 76.3 1.0 CD1 E:TYR451 3.8 70.7 1.0 CG1 E:VAL350 3.9 84.0 1.0 OG E:SER349 3.9 77.0 1.0 C E:LEU452 3.9 69.8 1.0 CA E:TYR451 3.9 67.5 1.0 C E:VAL401 3.9 72.3 1.0 C E:TYR451 4.0 69.7 1.0 CG E:TYR451 4.0 67.6 1.0 CB E:VAL350 4.2 80.1 1.0 CA E:VAL350 4.3 76.0 1.0 O E:ALA348 4.3 73.5 1.0 CA E:LEU452 4.4 75.5 1.0 N E:SER349 4.5 78.3 1.0 CB E:VAL401 4.5 68.9 1.0 N E:VAL401 4.6 88.4 1.0 CA E:VAL401 4.6 77.4 1.0 CG1 E:VAL401 4.6 78.6 1.0 C E:ALA348 4.8 74.8 1.0 O E:TYR451 4.8 70.4 1.0 CG E:TYR495 4.9 82.0 1.0 N E:ILE402 5.0 73.1 1.0 CZ E:TYR495 5.0 90.3 1.0 O E:SER349 5.0 81.2 1.0

E.Erausquin, F.Glaser, J.Fernandez-Recio, J.Lopez-Sagaseta. Structural Bases For the Higher Adherence to ACE2 Conferred By the Sars-Cov-2 Spike Q498Y Substitution. Acta Crystallogr D Struct V. 78 1156 2022BIOL.
ISSN: ISSN 2059-7983
PubMed: 36048155
DOI: 10.1107/S2059798322007677