Chlorine in PDB 7ps6: Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Beta Variant Spike Glycoprotein in Complex with Beta-44 and Beta-54 Fabs

The structure of Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Beta Variant Spike Glycoprotein in Complex with Beta-44 and Beta-54 Fabs, PDB code: 7ps6 was solved by D.Zhou, J.Ren, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.93 / 2.26
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	129.377, 112.567, 99.854, 90, 90, 90
R / Rfree (%)	21.5 / 24

The binding sites of Chlorine atom in the Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Beta Variant Spike Glycoprotein in Complex with Beta-44 and Beta-54 Fabs (pdb code 7ps6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Beta Variant Spike Glycoprotein in Complex with Beta-44 and Beta-54 Fabs, PDB code: 7ps6:

Chlorine binding site 1 out of 1 in the Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Beta Variant Spike Glycoprotein in Complex with Beta-44 and Beta-54 Fabs


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Receptor Binding Domain of Sars-Cov-2 Beta Variant Spike Glycoprotein in Complex with Beta-44 and Beta-54 Fabs within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl503 b:76.8 occ:1.00 O C:HOH606 3.1 62.6 1.0 N D:PHE101 3.1 63.1 1.0 N C:TRP47 3.2 69.8 1.0 CA D:VAL100 3.7 67.5 1.0 CD2 D:PHE101 3.8 67.6 1.0 CA C:GLU46 3.8 67.7 1.0 CB C:TRP47 3.9 64.3 1.0 CB D:PHE101 3.9 64.5 1.0 C D:VAL100 3.9 68.9 1.0 C C:GLU46 4.0 69.3 1.0 CA D:PHE101 4.0 65.7 1.0 CA C:TRP47 4.1 67.8 1.0 O D:HOH406 4.2 68.7 1.0 O C:LEU45 4.2 70.9 1.0 O D:TRP99 4.3 68.4 1.0 CG D:PHE101 4.3 68.2 1.0 CG2 D:VAL100 4.4 70.3 1.0 O C:TRP47 4.5 69.6 1.0 O D:PHE101 4.5 70.5 1.0 CB D:VAL100 4.6 68.8 1.0 CG C:GLU46 4.6 81.9 1.0 CB C:GLU46 4.7 73.1 1.0 N D:VAL100 4.7 60.5 1.0 C D:PHE101 4.8 70.3 1.0 N C:GLU46 4.8 66.8 1.0 C C:TRP47 4.8 64.8 1.0 C D:TRP99 4.9 66.9 1.0 C C:LEU45 4.9 70.8 1.0 CE2 D:PHE101 4.9 63.3 1.0

C.Liu, D.Zhou, R.Nutalai, H.M.Duyvesteyn, A.Tuekprakhon, H.M.Ginn, W.Dejnirattisai, P.Supasa, A.J.Mentzer, B.Wang, J.B.Case, Y.Zhao, D.T.Skelly, R.E.Chen, S.A.Johnson, T.G.Ritter, C.Mason, T.Malik, N.Temperton, N.G.Paterson, M.A.Williams, D.R.Hall, D.K.Clare, A.Howe, P.J.Goulder, E.E.Fry, M.S.Diamond, J.Mongkolsapaya, J.Ren, D.I.Stuart, G.R.Screaton. The Antibody Response to Sars-Cov-2 Beta Underscores the Antigenic Distance to Other Variants Cell Host Microbe 2021.
ISSN: ESSN 1934-6069
DOI: 10.1016/J.CHOM.2021.11.013