Chlorine in PDB 7q71: The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum

Protein crystallography data

The structure of The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum, PDB code: 7q71 was solved by I.M.L.Billas, A.G.Mcewen, I.Hazemann, D.Moras, V.Laudet, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.93 / 2.00
Space group P 32 1 2
Cell size a, b, c (Å), α, β, γ (°) 46.29, 46.29, 163.017, 90, 90, 120
R / Rfree (%) 19.2 / 23.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum (pdb code 7q71). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum, PDB code: 7q71:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7q71

Go back to Chlorine Binding Sites List in 7q71
Chlorine binding site 1 out of 2 in the The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:68.3
occ:1.00
N A:ILE179 2.9 38.0 1.0
O A:HOH666 3.1 67.0 1.0
NE2 A:HIS262 3.2 43.2 1.0
O A:HOH632 3.4 58.3 1.0
CB A:ILE179 3.7 39.6 1.0
CA A:LEU178 3.7 35.7 1.0
CA A:ILE179 3.7 36.0 1.0
O A:ILE179 3.8 41.4 1.0
C A:LEU178 3.8 40.5 1.0
O A:HOH651 3.9 74.3 1.0
CE1 A:HIS262 3.9 42.7 1.0
CG1 A:ILE179 4.0 41.7 1.0
CD2 A:LEU178 4.1 46.3 1.0
O A:HOH670 4.2 61.3 1.0
CB A:LEU178 4.2 36.7 1.0
C A:ILE179 4.3 40.1 1.0
CD2 A:HIS262 4.4 43.0 1.0
NH2 A:ARG181 4.5 61.4 1.0
O A:ASP177 4.7 40.4 1.0
CG A:LEU178 4.8 42.4 1.0
CD1 A:ILE179 4.9 37.0 1.0
O A:HOH660 4.9 64.9 1.0
N A:LEU178 4.9 35.2 1.0
NE A:ARG181 5.0 58.9 1.0
O A:LEU178 5.0 39.0 1.0

Chlorine binding site 2 out of 2 in 7q71

Go back to Chlorine Binding Sites List in 7q71
Chlorine binding site 2 out of 2 in the The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystallographic Structure of the Ligand Binding Domain of the NR7 Nuclear Receptor From the Amphioxus Branchiostoma Lanceolatum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:101.7
occ:0.50
NZ A:LYS332 3.3 137.0 1.0
CE A:LYS332 3.7 129.5 1.0
CD A:LYS332 4.1 111.6 1.0
O A:HOH634 4.9 64.9 1.0

Reference:

B.Beinsteiner, G.V.Markov, M.Bourguet, A.G.Mcewen, S.Erb, A.K.M.Patel, F.Z.El Khaloufi El Khaddar, C.Lecroisey, G.Holzer, K.Essabri, I.Hazemann, A.Hamiche, S.Cianferani, D.Moras, V.Laudet, I.M.L.Billas. A Novel Nuclear Receptor Subfamily Enlightens the Origin of Heterodimerization. Bmc Biol. V. 20 217 2022.
ISSN: ESSN 1741-7007
PubMed: 36199108
DOI: 10.1186/S12915-022-01413-0
Page generated: Tue Jul 30 03:04:38 2024

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