Chlorine in PDB 7q79: Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary

Enzymatic activity of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary

All present enzymatic activity of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary:
4.6.1.18;

Protein crystallography data

The structure of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary, PDB code: 7q79 was solved by J.Lieske, S.Guenther, S.Saouane, A.Meents, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.00 / 1.55
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.4, 64.4, 64.75, 90, 90, 120
R / Rfree (%) 15.6 / 18.8

Other elements in 7q79:

The structure of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary (pdb code 7q79). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary, PDB code: 7q79:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7q79

Go back to Chlorine Binding Sites List in 7q79
Chlorine binding site 1 out of 3 in the Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:47.5
occ:1.00
HZ2 A:LYS61 2.4 31.8 1.0
HZ1 A:LYS61 3.1 31.8 1.0
NZ A:LYS61 3.1 26.5 1.0
O A:HOH305 3.2 34.2 1.0
HE3 A:LYS61 3.4 34.0 1.0
HD2 A:LYS61 3.4 28.7 1.0
O A:HOH350 3.5 33.0 1.0
CE A:LYS61 3.7 28.4 1.0
HZ3 A:LYS61 3.8 31.8 1.0
CD A:LYS61 4.0 24.0 1.0
HD3 A:LYS61 4.4 28.7 1.0
O A:HOH372 4.5 33.9 1.0
HE2 A:LYS61 4.6 34.0 1.0
H A:ASN62 5.0 26.2 1.0

Chlorine binding site 2 out of 3 in 7q79

Go back to Chlorine Binding Sites List in 7q79
Chlorine binding site 2 out of 3 in the Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:33.9
occ:1.00
HD22 A:ASN34 2.2 48.3 1.0
HD2 A:ARG10 2.9 27.4 1.0
ND2 A:ASN34 3.0 40.3 1.0
O A:HOH360 3.2 33.5 1.0
HD3 A:ARG10 3.2 27.4 1.0
HB2 A:ASN34 3.3 36.9 1.0
CD A:ARG10 3.4 22.8 1.0
HD21 A:ASN34 3.4 48.3 1.0
NE A:ARG10 3.8 21.0 1.0
CG A:ASN34 3.9 36.7 1.0
CB A:ASN34 3.9 30.8 1.0
HB3 A:ASN34 4.1 36.9 1.0
HH11 A:ARG10 4.1 31.9 1.0
HE A:ARG10 4.2 25.2 1.0
CZ A:ARG10 4.3 25.0 1.0
NH1 A:ARG10 4.4 26.6 1.0
O A:ARG33 4.7 26.2 1.0
CG A:ARG10 4.8 20.0 1.0
HZ2 A:LYS37 4.9 52.9 0.5
HG3 A:ARG10 4.9 23.9 1.0
HH12 A:ARG10 5.0 31.9 1.0

Chlorine binding site 3 out of 3 in 7q79

Go back to Chlorine Binding Sites List in 7q79
Chlorine binding site 3 out of 3 in the Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:33.1
occ:1.00
H A:THR45 2.5 20.1 1.0
HE1 A:HIS12 2.7 22.0 1.0
HA A:ASN44 2.8 20.9 1.0
N A:THR45 3.2 16.8 1.0
HD1 A:PHE120 3.3 35.5 1.0
HB3 A:PHE120 3.3 32.2 1.0
HB A:THR45 3.4 21.8 1.0
CE1 A:HIS12 3.4 18.3 1.0
CA A:ASN44 3.7 17.4 1.0
OG1 A:THR45 3.7 23.3 1.0
CD1 A:PHE120 3.8 29.6 1.0
C A:ASN44 3.9 21.4 1.0
CB A:THR45 3.9 18.2 1.0
HG12 A:VAL43 4.0 23.8 0.8
HD1 A:HIS12 4.1 20.7 1.0
ND1 A:HIS12 4.1 17.3 1.0
CB A:PHE120 4.1 26.9 1.0
HG23 A:VAL43 4.2 23.8 0.2
CA A:THR45 4.2 15.9 1.0
OD1 A:ASN44 4.2 24.7 1.0
HZ1 A:LYS41 4.2 57.8 1.0
CG A:PHE120 4.2 22.2 1.0
HG1 A:THR45 4.3 27.9 1.0
HZ3 A:LYS41 4.3 57.8 1.0
NE2 A:HIS12 4.3 18.5 1.0
O A:VAL43 4.4 20.8 1.0
N A:ASN44 4.4 19.1 1.0
HE2 A:HIS12 4.5 22.2 1.0
HB2 A:PHE120 4.5 32.2 1.0
O A:PHE120 4.6 26.9 1.0
CE1 A:PHE120 4.6 31.9 1.0
O4 A:SO4201 4.6 81.4 0.8
CG A:ASN44 4.7 22.4 1.0
C A:VAL43 4.7 19.3 1.0
HE1 A:PHE120 4.7 38.2 1.0
CB A:ASN44 4.7 18.6 1.0
NZ A:LYS41 4.7 48.2 1.0
O A:THR45 4.8 18.4 1.0
HA A:THR45 4.9 19.0 1.0
O1 A:SO4201 4.9 65.1 0.8
H A:ASN44 4.9 22.8 1.0
CG1 A:VAL43 5.0 19.8 0.8

Reference:

J.Lieske, S.Saouane, S.Guenther, J.Meyer, T.Pakendorf, B.Reime, A.Burkhardt, E.Crosas, J.Hakanpaeae, K.Stachnik, J.Sieg, M.Rarey, M.H.Abdellatif, A.G.Gabdulkhakov, G.K.Selikhanov, H.N.Chapman, A.Meents. Fixed-Target High-Pressure Macromolecular Crystallography To Be Published.
Page generated: Tue Jul 30 03:05:48 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy