Chlorine in PDB 7qip: Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma

The structure of Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma, PDB code: 7qip was solved by N.N.Sluchanko, K.V.Tugaeva, J.L.R.Smith, A.A.Antson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	70.49 / 2.65
Space group	P 41
Cell size a, b, c (Å), α, β, γ (°)	99.688, 99.688, 58.575, 90, 90, 90
R / Rfree (%)	23 / 26.6

The binding sites of Chlorine atom in the Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma (pdb code 7qip). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma, PDB code: 7qip:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl301 b:73.9 occ:1.00 HD22 A:ASN42 2.1 64.5 0.0 HA A:GLU39 3.0 74.3 0.0 ND2 A:ASN42 3.1 59.9 1.0 HB2 A:ASN42 3.3 58.1 0.0 HE C:ARG209 3.4 108.7 0.0 HG3 A:GLU39 3.5 90.8 0.0 HD21 A:ASN42 3.6 63.9 0.0 HD3 C:ARG209 3.8 104.0 0.0 HG3 C:ARG209 3.9 98.0 0.0 NE C:ARG209 3.9 80.0 1.0 CG A:ASN42 4.0 58.5 1.0 CB A:ASN42 4.0 55.4 1.0 CA A:GLU39 4.0 66.8 1.0 HB3 A:ASN42 4.1 56.4 0.0 CD C:ARG209 4.3 77.0 1.0 CG A:GLU39 4.4 79.5 1.0 O A:GLU39 4.4 64.9 1.0 HG2 A:GLU39 4.5 89.2 0.0 HH11 C:ARG209 4.5 115.8 0.0 CB A:GLU39 4.6 70.6 1.0 HB2 A:GLU39 4.6 82.6 0.0 CG C:ARG209 4.6 74.3 1.0 CZ C:ARG209 4.7 82.3 1.0 C A:GLU39 4.8 64.4 1.0 NH1 C:ARG209 4.9 81.9 1.0 N A:GLU39 4.9 67.9 1.0 O A:CYS38 5.0 70.5 1.0

Chlorine binding site 2 out of 3 in the Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl301 b:63.5 occ:1.00 H B:ARG3 2.7 107.5 0.0 O B:HOH403 2.8 65.6 1.0 O B:HOH424 3.1 55.5 1.0 HA B:GLU2 3.2 116.6 0.0 HG2 B:GLU2 3.4 131.0 0.0 N B:ARG3 3.7 82.7 1.0 HB2 B:ARG3 3.7 100.8 0.0 HZ2 B:LYS32 3.8 115.2 0.0 HB3 B:ARG3 3.9 101.0 0.0 HB3 B:GLU2 4.0 118.3 0.0 CA B:GLU2 4.1 87.8 1.0 HE3 B:LYS32 4.2 106.8 0.0 CB B:ARG3 4.2 79.5 1.0 CG B:GLU2 4.3 96.1 1.0 CB B:GLU2 4.4 90.2 1.0 C B:GLU2 4.4 85.2 1.0 CA B:ARG3 4.6 80.6 1.0 NZ B:LYS32 4.6 85.5 1.0 HD2 B:LYS32 4.7 105.5 0.0 H B:ALA4 4.8 99.8 0.0 HZ1 B:LYS32 4.9 113.8 0.0 CE B:LYS32 4.9 83.8 1.0

Chlorine binding site 3 out of 3 in the Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Sars-Cov-2 Nucleocapsid Phosphopeptide 201-210 Bound to Human 14-3-3 Sigma within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl302 b:65.7 occ:1.00 HD22 B:ASN42 2.2 50.6 0.0 O B:HOH407 3.0 45.1 1.0 HA B:GLU39 3.0 62.2 0.0 ND2 B:ASN42 3.2 52.7 1.0 HE D:ARG209 3.2 66.0 0.0 HD3 D:ARG209 3.4 65.9 0.0 HG3 B:GLU39 3.5 77.0 0.0 HB2 B:ASN42 3.5 46.6 0.0 HD21 B:ASN42 3.6 50.4 0.0 HG3 D:ARG209 3.6 68.3 0.0 NE D:ARG209 3.7 60.5 1.0 CD D:ARG209 3.9 61.6 1.0 CA B:GLU39 4.1 61.7 1.0 CG B:ASN42 4.2 52.9 1.0 CB B:ASN42 4.2 49.8 1.0 CG D:ARG209 4.3 62.7 1.0 HB3 B:ASN42 4.3 45.3 0.0 CG B:GLU39 4.3 74.0 1.0 CZ D:ARG209 4.5 60.4 1.0 HG2 B:GLU39 4.5 76.0 0.0 HH21 D:ARG209 4.5 64.6 0.0 O B:GLU39 4.6 59.1 1.0 HB2 B:GLU39 4.6 69.7 0.0 CB B:GLU39 4.6 65.4 1.0 HG2 D:ARG209 4.8 66.7 0.0 NH2 D:ARG209 4.8 57.9 1.0 C B:GLU39 4.9 58.8 1.0 N B:GLU39 4.9 62.9 1.0 HD2 D:ARG209 5.0 63.8 0.0

N.N.Sluchanko, K.V.Tugaeva, J.L.R.Smith, A.A.Antson. Sars-Cov-2 Nucleocapsid Phosphopeptide 193-200 Bound to Human 14-3-3 Sigma To Be Published.