Chlorine in PDB 7r0s: Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin

Protein crystallography data

The structure of Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin, PDB code: 7r0s was solved by A.Esposito Verza, R.Miggiano, R.Rizzi, F.Rossi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.94 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.933, 92.135, 102.462, 90, 90, 90
R / Rfree (%) 18.5 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin (pdb code 7r0s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin, PDB code: 7r0s:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7r0s

Go back to Chlorine Binding Sites List in 7r0s
Chlorine binding site 1 out of 2 in the Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:26.6
occ:1.00
N A:ASN175 3.4 17.7 1.0
N A:GLU238 3.5 19.8 1.0
CG A:GLU238 3.5 34.6 1.0
CB A:GLU238 3.5 28.9 1.0
ND2 A:ASN175 3.7 23.3 1.0
CA A:ARG174 3.8 15.2 1.0
CB A:ASN175 4.0 21.9 1.0
CD1 A:PHE336 4.0 22.1 1.0
CA A:GLU238 4.1 24.3 1.0
C A:ARG174 4.1 15.7 1.0
N A:TYR237 4.1 19.8 1.0
O A:ALA173 4.1 15.1 1.0
CB A:TYR237 4.2 23.7 1.0
CG A:ARG174 4.3 16.7 1.0
CA A:ASN175 4.3 18.8 1.0
CD A:PRO337 4.3 35.5 1.0
CG A:ASN175 4.4 21.9 1.0
C A:TYR237 4.4 19.6 1.0
CA A:TYR237 4.5 20.6 1.0
CB A:TYR236 4.5 18.5 1.0
CB A:ARG174 4.6 14.7 1.0
CE1 A:PHE336 4.7 20.9 1.0
CG A:PRO337 4.7 37.7 1.0
C A:TYR236 4.7 19.9 1.0
CB A:PHE336 4.8 25.2 1.0
CG A:PHE336 4.8 25.3 1.0
N A:ARG174 4.8 14.9 1.0
CD2 A:TYR237 4.9 31.1 1.0
O A:HOH504 4.9 23.4 1.0
C A:ALA173 4.9 15.0 1.0
CA A:TYR236 5.0 18.3 1.0
CD A:GLU238 5.0 36.4 1.0

Chlorine binding site 2 out of 2 in 7r0s

Go back to Chlorine Binding Sites List in 7r0s
Chlorine binding site 2 out of 2 in the Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Cytosolic Sulfotransferase of Anopheles Gambiae (AGAP001425) in Complex with Vanillin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl404

b:26.2
occ:1.00
N B:ASN175 3.4 18.1 1.0
N B:GLU238 3.4 19.8 1.0
CG B:GLU238 3.5 39.5 1.0
CB B:GLU238 3.5 31.4 1.0
ND2 B:ASN175 3.6 22.6 1.0
CA B:ARG174 3.8 15.8 1.0
CD1 B:PHE336 4.0 21.4 1.0
CB B:ASN175 4.0 22.4 1.0
CA B:GLU238 4.1 25.9 1.0
C B:ARG174 4.1 15.9 1.0
N B:TYR237 4.2 19.6 1.0
O B:ALA173 4.2 17.0 1.0
CB B:TYR237 4.2 24.3 1.0
CG B:ARG174 4.3 17.2 1.0
CA B:ASN175 4.3 19.6 1.0
CD B:PRO337 4.3 33.2 1.0
CG B:ASN175 4.3 21.8 1.0
C B:TYR237 4.4 20.2 1.0
CA B:TYR237 4.5 21.7 1.0
CB B:TYR236 4.5 19.3 1.0
CB B:ARG174 4.6 15.2 1.0
CE1 B:PHE336 4.7 20.8 1.0
CG B:PRO337 4.7 38.1 1.0
C B:TYR236 4.7 19.3 1.0
CB B:PHE336 4.8 22.9 1.0
CG B:PHE336 4.8 23.4 1.0
N B:ARG174 4.8 14.7 1.0
O B:HOH503 4.8 23.9 1.0
CD2 B:TYR237 4.9 29.4 1.0
C B:ALA173 4.9 14.9 1.0
CD B:GLU238 4.9 44.4 1.0
CA B:TYR236 5.0 18.4 1.0

Reference:

A.Esposito Verza, R.Miggiano, F.Lombardo, C.Fiorillo, B.Arca, B.Purghe, E.Del Grosso, U.Galli, M.Rizzi, F.Rossi. Biochemical and Structural Analysis of A Cytosolic Sulfotransferase of the Malaria Vector Anopheles Gambiae Overexpressed in the Reproductive Tissues. Curr Res Struct Biol V. 4 246 2022.
ISSN: ESSN 2665-928X
PubMed: 35941867
DOI: 10.1016/J.CRSTBI.2022.07.001
Page generated: Tue Jul 30 03:26:14 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy