Chlorine in PDB 7r48: Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)

Enzymatic activity of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)

All present enzymatic activity of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map):
1.6.5.3; 1.6.99.3; 7.1.1.2;

Other elements in 7r48:

The structure of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) also contains other interesting chemical elements:

Zinc (Zn) 1 atom
Iron (Fe) 28 atoms
Iodine (I) 2 atoms
Magnesium (Mg) 1 atom
Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) (pdb code 7r48). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map), PDB code: 7r48:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7r48

Go back to Chlorine Binding Sites List in 7r48
Chlorine binding site 1 out of 2 in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl403

b:56.3
occ:1.00
CL01 H:I49403 0.0 56.3 1.0
C12 H:I49403 1.7 56.3 1.0
C10 H:I49403 2.7 56.3 1.0
C13 H:I49403 2.7 56.3 1.0
O H:PRO48 3.0 41.6 1.0
I02 H:I49403 3.3 56.3 1.0
C H:PRO48 3.8 41.6 1.0
CB H:ALA52 3.8 44.5 1.0
CA H:PRO48 3.9 41.6 1.0
CB H:ALA18 4.0 40.9 1.0
C07 H:I49403 4.0 56.3 1.0
C11 H:I49403 4.0 56.3 1.0
N H:ALA52 4.0 44.5 1.0
CB H:PRO48 4.0 41.6 1.0
CA H:ALA18 4.1 40.9 1.0
CA H:ALA52 4.2 44.5 1.0
O H:ALA18 4.3 40.9 1.0
OG1 H:THR21 4.4 43.7 1.0
CB H:ASP51 4.5 44.5 1.0
C09 H:I49403 4.5 56.3 1.0
C H:ALA18 4.7 40.9 1.0
C H:ASP51 4.8 44.5 1.0
CG2 H:THR21 4.9 43.7 1.0
N H:ILE49 5.0 43.0 1.0

Chlorine binding site 2 out of 2 in 7r48

Go back to Chlorine Binding Sites List in 7r48
Chlorine binding site 2 out of 2 in the Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Bovine Complex I in the Presence of IM1761092, Deactive Class IV (Composite Map) within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Cl504

b:56.5
occ:1.00
CL01 N:I49504 0.0 56.5 1.0
C12 N:I49504 1.7 56.5 1.0
C10 N:I49504 2.7 56.5 1.0
C13 N:I49504 2.7 56.5 1.0
I02 N:I49504 3.4 56.5 1.0
O d:MET82 3.7 44.3 1.0
CB d:ARG86 3.9 45.3 1.0
C07 N:I49504 4.0 56.5 1.0
C11 N:I49504 4.0 56.5 1.0
N d:ARG86 4.0 45.3 1.0
CA d:ARG86 4.1 45.3 1.0
CE d:MET82 4.1 44.3 1.0
OE1 N:GLU347 4.2 45.2 1.0
CG1 d:VAL85 4.4 45.9 1.0
C09 N:I49504 4.5 56.5 1.0
CB N:GLU347 4.6 45.2 1.0
CD N:GLU347 4.6 45.2 1.0
C d:MET82 4.7 44.3 1.0
CG N:GLU347 4.7 45.2 1.0
C d:VAL85 4.7 45.9 1.0
CG d:ARG86 4.8 45.3 1.0
CB d:VAL85 4.8 45.9 1.0
NE1 h:TRP122 4.8 47.2 1.0

Reference:

H.R.Bridges, J.N.Blaza, Z.Yin, I.Chung, M.N.Pollak, J.Hirst. Structural Basis of Mammalian Respiratory Complex I Inhibition By Medicinal Biguanides. Science V. 379 351 2023.
ISSN: ESSN 1095-9203
PubMed: 36701435
DOI: 10.1126/SCIENCE.ADE3332
Page generated: Tue Jul 30 03:28:55 2024

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