Chlorine in PDB 7r86: Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R)

Protein crystallography data

The structure of Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R), PDB code: 7r86 was solved by Y.Miao, K.M.Jude, K.C.Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.87 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.468, 95.315, 69.682, 90, 105.39, 90
R / Rfree (%) 16.5 / 19.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R) (pdb code 7r86). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R), PDB code: 7r86:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7r86

Go back to Chlorine Binding Sites List in 7r86
Chlorine binding site 1 out of 2 in the Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl410

b:21.7
occ:1.00
OH A:TYR232 3.1 21.5 1.0
O C:HOH315 3.1 20.1 1.0
N C:CYS13 3.3 18.9 1.0
NH2 A:ARG256 3.3 19.4 1.0
NH1 C:ARG22 3.4 22.2 1.0
NE A:ARG256 3.7 20.1 1.0
CE1 A:TYR232 3.8 18.4 1.0
CZ A:TYR232 3.8 20.0 1.0
CA C:LEU12 3.9 19.4 1.0
CD2 C:LEU12 3.9 20.7 1.0
CZ A:ARG256 3.9 23.1 1.0
CB A:TYR254 4.0 18.1 1.0
CB C:CYS13 4.0 20.4 1.0
CB C:LEU12 4.1 18.1 1.0
C C:LEU12 4.1 18.8 1.0
CA C:CYS13 4.3 19.2 1.0
CG A:TYR254 4.3 18.9 1.0
CZ C:ARG22 4.4 23.4 1.0
NH2 C:ARG22 4.4 22.8 1.0
CD1 C:ILE50 4.5 29.1 1.0
CD1 A:TYR254 4.5 19.7 1.0
CG C:LEU12 4.7 23.6 1.0
CG2 A:THR230 4.8 18.3 1.0
CG1 C:ILE50 4.9 29.0 1.0
CD A:ARG256 4.9 18.6 1.0
CD2 A:TYR254 5.0 19.5 1.0

Chlorine binding site 2 out of 2 in 7r86

Go back to Chlorine Binding Sites List in 7r86
Chlorine binding site 2 out of 2 in the Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl406

b:22.7
occ:1.00
OH B:TYR232 3.0 23.4 1.0
O D:HOH316 3.1 23.3 1.0
NH2 B:ARG256 3.3 20.8 1.0
N D:CYS13 3.3 19.9 1.0
NH1 D:ARG22 3.4 24.2 1.0
NE B:ARG256 3.6 19.3 1.0
CE1 B:TYR232 3.8 18.1 1.0
CZ B:TYR232 3.8 22.6 1.0
CA D:LEU12 3.9 19.5 1.0
CZ B:ARG256 3.9 22.1 1.0
CD2 D:LEU12 3.9 25.8 1.0
CB D:CYS13 4.0 22.5 1.0
CB B:TYR254 4.0 19.7 1.0
CB D:LEU12 4.1 20.1 1.0
C D:LEU12 4.1 20.4 1.0
CA D:CYS13 4.3 22.0 1.0
CG B:TYR254 4.3 20.8 1.0
CZ D:ARG22 4.4 23.9 1.0
CD1 D:ILE50 4.4 31.6 1.0
NH2 D:ARG22 4.4 23.4 1.0
CD1 B:TYR254 4.6 22.0 1.0
CG D:LEU12 4.7 22.9 1.0
CG1 D:ILE50 4.8 30.8 1.0
CG2 B:THR230 4.8 21.8 1.0
CD B:ARG256 4.9 18.9 1.0
CD2 B:TYR254 5.0 21.4 1.0

Reference:

Y.Miao, K.M.Jude, K.C.Garcia. Structure of Mouse BAI1 (ADGRB1) in Complex with Mouse Nogo Receptor (RTN4R) To Be Published.
Page generated: Thu Nov 25 08:55:36 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy