Chlorine in PDB 7rft: Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose

Protein crystallography data

The structure of Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose, PDB code: 7rft was solved by N.Koropatkin, F.Cerqueira, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.52 / 1.53
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 121.837, 64.668, 64.734, 90, 102.76, 90
R / Rfree (%) 17.5 / 19.7

Other elements in 7rft:

The structure of Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose (pdb code 7rft). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose, PDB code: 7rft:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7rft

Go back to Chlorine Binding Sites List in 7rft
Chlorine binding site 1 out of 2 in the Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:16.7
occ:1.00
N B:GLU185 3.1 17.6 1.0
N A:GLU185 3.2 17.4 1.0
O A:HOH499 3.2 18.4 1.0
O B:HOH443 3.2 19.0 1.0
NE2 A:HIS182 3.3 17.4 0.5
NE2 B:HIS182 3.3 17.7 0.5
CA B:THR184 3.5 17.4 1.0
CA A:THR184 3.6 17.4 1.0
C B:THR184 3.8 17.3 1.0
C A:THR184 3.8 17.3 1.0
CB B:GLU185 3.9 18.2 1.0
CB A:GLU185 3.9 18.1 1.0
CE1 A:HIS182 4.0 17.6 0.5
CB B:THR184 4.0 17.9 1.0
CE1 B:HIS182 4.0 17.5 0.5
CB A:THR184 4.1 17.5 1.0
CA B:GLU185 4.1 18.0 1.0
CA A:GLU185 4.1 17.8 1.0
CG2 B:VAL149 4.2 17.9 1.0
CG2 A:VAL149 4.2 17.4 1.0
CD2 B:HIS182 4.3 17.5 0.5
CD2 A:HIS182 4.4 17.4 0.5
CG2 B:THR184 4.5 18.0 1.0
CG2 A:THR184 4.5 17.6 1.0
O B:VAL183 4.6 17.1 1.0
O A:VAL183 4.7 18.2 1.0
N B:THR184 4.7 17.2 1.0
N A:THR184 4.8 17.4 1.0
O B:THR184 4.9 17.1 1.0
O A:THR184 5.0 17.4 1.0

Chlorine binding site 2 out of 2 in 7rft

Go back to Chlorine Binding Sites List in 7rft
Chlorine binding site 2 out of 2 in the Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Domain 1 of Starch Adherence System Protein 20 (SAS20) From Ruminococcus Bromii with Maltotriose within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:36.2
occ:1.00
O A:HOH542 3.0 32.9 1.0
O B:HOH457 3.3 36.7 1.0
N B:GLU216 3.3 20.8 1.0
CB B:GLU216 3.5 22.1 1.0
CD B:PRO215 3.6 21.3 1.0
CB B:THR214 3.7 21.5 1.0
N B:PRO215 3.9 20.8 1.0
OG1 B:THR214 3.9 21.8 1.0
CA B:GLU216 4.0 21.0 1.0
CB B:PRO215 4.0 21.4 1.0
CG B:PRO215 4.2 21.4 1.0
C B:PRO215 4.2 20.7 1.0
CA B:PRO215 4.3 20.9 1.0
C B:THR214 4.5 20.6 1.0
CA B:THR214 4.6 21.0 1.0
CG2 B:THR214 4.7 21.9 1.0
OE1 B:GLU216 4.8 24.9 1.0
CD A:LYS211 4.8 29.7 1.0
CG B:GLU216 4.8 22.9 1.0
CB A:LYS211 4.9 26.5 1.0
NZ A:LYS211 4.9 32.5 1.0
CG A:LYS211 5.0 28.1 1.0

Reference:

F.M.Cerqueira, A.L.Photenhauer, H.L.Doden, A.N.Brown, A.M.Abdel-Hamid, S.Morais, E.A.Bayer, Z.Wawrzak, I.Cann, J.M.Ridlon, J.B.Hopkins, N.M.Koropatkin. SAS20 Is A Highly Flexible Starch-Binding Protein in the Ruminococcus Bromii Cell-Surface Amylosome. J.Biol.Chem. V. 298 01896 2022.
ISSN: ESSN 1083-351X
PubMed: 35378131
DOI: 10.1016/J.JBC.2022.101896
Page generated: Tue Apr 4 21:33:55 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy