Chlorine in PDB 7rgr: Lysozyme 056 From Deep Neural Language Modeling

Enzymatic activity of Lysozyme 056 From Deep Neural Language Modeling

All present enzymatic activity of Lysozyme 056 From Deep Neural Language Modeling:
3.2.1.17;

Protein crystallography data

The structure of Lysozyme 056 From Deep Neural Language Modeling, PDB code: 7rgr was solved by J.S.Fraser, J.M.Holton, J.L.Olmos Jr., E.R.Greene, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.43 / 2.48
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.15, 68.1, 95.41, 90, 90, 90
R / Rfree (%) 25.9 / 29.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lysozyme 056 From Deep Neural Language Modeling (pdb code 7rgr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Lysozyme 056 From Deep Neural Language Modeling, PDB code: 7rgr:

Chlorine binding site 1 out of 1 in 7rgr

Go back to Chlorine Binding Sites List in 7rgr
Chlorine binding site 1 out of 1 in the Lysozyme 056 From Deep Neural Language Modeling


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lysozyme 056 From Deep Neural Language Modeling within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:58.6
occ:1.00
HE21 A:GLN48 2.1 79.9 1.0
HH12 B:ARG100 2.9 69.3 1.0
NE2 A:GLN48 2.9 66.3 1.0
HH22 B:ARG100 3.0 84.1 1.0
HG3 A:GLN48 3.2 86.9 1.0
HD21 A:ASN52 3.3 70.9 1.0
HE22 A:GLN48 3.4 79.9 1.0
NH1 B:ARG100 3.6 57.5 1.0
HE2 B:TYR92 3.7 76.8 1.0
NH2 B:ARG100 3.7 69.8 1.0
HG2 A:GLN48 3.7 86.9 1.0
CG A:GLN48 3.8 72.2 1.0
CD A:GLN48 3.8 62.8 1.0
CZ B:ARG100 4.1 60.8 1.0
ND2 A:ASN52 4.1 58.8 1.0
HH11 B:ARG100 4.2 69.3 1.0
HH21 B:ARG100 4.4 84.1 1.0
HD11 B:LEU83 4.5 76.2 1.0
OD1 A:ASN52 4.5 54.1 1.0
CE2 B:TYR92 4.5 63.7 1.0
HD22 A:ASN52 4.7 70.9 1.0
HD2 B:TYR92 4.8 73.2 1.0
CG A:ASN52 4.8 53.7 1.0
HH B:TYR92 4.9 76.0 1.0
HD21 B:LEU83 4.9 73.4 1.0
OE1 A:GLN48 4.9 60.2 1.0

Reference:

A.Madani, B.Krause, E.R.Greene, S.Subramanian, B.P.Mohr, J.L.Olmos Jr., J.M.Holton, C.Xiong, Z.Z.Sun, R.Socher, J.S.Fraser, N.D.Naik. Deep Neural Language Modeling Enables Functional Protein Generation Across Families To Be Published.
Page generated: Tue Jul 30 03:36:27 2024

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