Chlorine in PDB 7rv3: Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124

The structure of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124, PDB code: 7rv3 was solved by D.A.Kuntz, G.G.Prive, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.15 / 1.35
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	30.452, 72.292, 55.154, 90, 105.26, 90
R / Rfree (%)	15.9 / 18.6

The binding sites of Chlorine atom in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124 (pdb code 7rv3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124, PDB code: 7rv3:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:8.9 occ:0.82 CL10 A:7R5201 0.0 8.9 0.8 C09 A:7R5201 1.7 9.7 0.8 H031 A:7R5201 2.6 10.3 0.8 C04 A:7R5201 2.7 9.4 0.8 C08 A:7R5201 2.7 11.1 0.8 HA A:ALA52 2.9 10.6 1.0 H081 A:7R5201 2.9 13.3 0.8 N03 A:7R5201 3.0 8.6 0.8 HD1 A:TYR58 3.0 14.1 1.0 HB3 A:MET51 3.2 10.6 1.0 O A:MET51 3.3 10.1 1.0 C A:MET51 3.5 9.0 1.0 N A:ALA52 3.6 8.7 1.0 CA A:ALA52 3.6 8.8 1.0 HB2 A:MET51 3.8 10.6 1.0 CD1 A:TYR58 3.8 11.8 1.0 HE1 A:TYR58 3.8 15.2 1.0 CB A:MET51 3.9 8.8 1.0 N07 A:7R5201 4.0 11.2 0.8 C05 A:7R5201 4.0 10.7 0.8 H A:ALA52 4.1 10.4 1.0 HE2 A:MET51 4.1 20.6 1.0 HB2 A:ALA52 4.1 11.0 1.0 CE1 A:TYR58 4.2 12.7 1.0 C02 A:7R5201 4.3 9.6 0.8 CA A:MET51 4.4 8.6 1.0 CB A:ALA52 4.5 9.2 1.0 C06 A:7R5201 4.5 11.0 0.8 HB2 A:TYR58 4.5 11.0 1.0 H111 A:7R5201 4.6 12.2 0.8 C A:ALA52 4.8 9.5 1.0 HB1 A:ALA52 4.8 11.0 1.0 H051 A:7R5201 4.8 12.9 0.8 HA A:MET51 4.8 10.3 1.0 CG A:TYR58 4.9 10.5 1.0 C11 A:7R5201 5.0 10.2 0.8 O A:THR48 5.0 8.8 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-9124 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl204 b:33.0 occ:1.00 H A:LEU31 2.1 11.4 1.0 O A:HOH379 2.8 38.4 1.0 N A:LEU31 3.0 9.5 1.0 HA A:ILE30 3.1 11.7 1.0 HA A:LEU31 3.2 11.9 1.0 HD23 A:LEU31 3.5 18.4 1.0 O A:HOH363 3.6 36.5 1.0 CA A:LEU31 3.6 9.9 1.0 O A:ASP29 3.8 15.2 1.0 C A:ILE30 4.0 8.9 1.0 HG A:LEU31 4.0 17.4 1.0 CA A:ILE30 4.0 9.7 1.0 HG23 A:ILE30 4.0 11.2 1.0 CD2 A:LEU31 4.3 15.3 1.0 H A:THR32 4.4 11.3 1.0 CG A:LEU31 4.5 14.5 1.0 O A:HOH349 4.5 40.6 1.0 HD21 A:LEU31 4.6 18.4 1.0 C A:LEU31 4.6 9.3 1.0 CB A:LEU31 4.7 11.2 1.0 O A:HOH369 4.7 33.3 1.0 CG2 A:ILE30 4.7 9.3 1.0 C A:ASP29 4.7 11.9 1.0 N A:THR32 4.8 9.4 1.0 HG12 A:ILE30 4.8 13.7 1.0 HG22 A:ILE30 4.8 11.2 1.0 N A:ILE30 4.9 9.3 1.0 CB A:ILE30 4.9 9.9 1.0

I.Watson, M.Isaac. Structure of the BCL6 Btb Domain To Be Published.