Chlorine in PDB 7rzd: Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide

Protein crystallography data

The structure of Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide, PDB code: 7rzd was solved by Y.Patskovsky, L.Patskovska, S.Nyovanie, A.Natarajan, B.Joshi, B.Morin, C.Brittsan, O.Huber, S.Gordon, X.Michelet, F.Schmitzberger, R.Stein, M.Findeis, A.Hurwitz, M.Van Dijk, J.Buell, D.Underwood, M.Krogsgaard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.47 / 1.82
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 65.897, 65.897, 238.899, 90, 90, 90
R / Rfree (%) 18 / 23.6

Other elements in 7rzd:

The structure of Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide (pdb code 7rzd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide, PDB code: 7rzd:

Chlorine binding site 1 out of 1 in 7rzd

Go back to Chlorine Binding Sites List in 7rzd
Chlorine binding site 1 out of 1 in the Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl102

b:45.0
occ:1.00
O A:HOH596 2.7 41.0 1.0
O B:HOH250 2.8 46.0 1.0
O B:HOH249 2.9 27.4 1.0
N B:VAL9 2.9 21.8 1.0
CA B:GLN8 3.5 23.6 1.0
O B:VAL9 3.5 27.3 1.0
O B:HOH311 3.6 48.4 1.0
C B:GLN8 3.7 24.1 1.0
CG1 B:VAL93 3.8 30.6 1.0
CA B:VAL9 3.9 21.3 1.0
CB B:GLN8 4.0 21.1 1.0
O B:HOH207 4.1 27.7 1.0
C B:VAL9 4.1 26.4 1.0
O B:HOH345 4.2 51.6 1.0
CB B:VAL9 4.2 28.4 1.0
O B:ILE7 4.3 26.0 1.0
CG2 B:VAL9 4.6 31.5 1.0
CG B:GLN8 4.6 23.6 1.0
N B:GLN8 4.6 20.8 1.0
C B:ILE7 4.8 23.0 1.0
O B:GLN8 4.9 25.9 1.0
O B:LYS94 5.0 30.9 1.0

Reference:

Y.Patskovsky, L.Patskovska, S.Nyovanie, A.Nataragan, B.Joshi, B.Morin, C.Brittsan, O.Huber, S.Gordon, X.Michelet, F.Schmitzberger, R.Stein, M.Findeis, A.Hurwitz, M.Van Dijk, J.Buell, D.Underwood, M.Krogsgaard. Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide To Be Published.
Page generated: Tue Apr 4 21:39:58 2023

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