Chlorine in PDB 7sor: Lam Domain of Human LARP1 in Complex with Aaa Rna

Protein crystallography data

The structure of Lam Domain of Human LARP1 in Complex with Aaa Rna, PDB code: 7sor was solved by G.Kozlov, K.Gehring, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.72 / 1.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.562, 55.89, 70.172, 90, 90, 90
R / Rfree (%) 18.1 / 20.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lam Domain of Human LARP1 in Complex with Aaa Rna (pdb code 7sor). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Lam Domain of Human LARP1 in Complex with Aaa Rna, PDB code: 7sor:

Chlorine binding site 1 out of 1 in 7sor

Go back to Chlorine Binding Sites List in 7sor
Chlorine binding site 1 out of 1 in the Lam Domain of Human LARP1 in Complex with Aaa Rna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lam Domain of Human LARP1 in Complex with Aaa Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:18.5
occ:1.00
NZ C:LYS352 3.2 22.6 1.0
O A:HOH628 3.3 23.0 1.0
CD2 A:HIS368 3.5 19.5 1.0
CG A:HIS368 3.5 15.5 1.0
CB A:GLN371 3.7 11.5 1.0
CG A:GLN371 3.8 12.5 1.0
CE C:LYS352 3.9 21.2 1.0
NE2 A:HIS368 3.9 22.9 1.0
ND1 A:HIS368 4.0 19.0 1.0
CA A:HIS368 4.0 13.3 1.0
CB A:HIS368 4.0 15.8 1.0
CE1 A:HIS368 4.2 23.3 1.0
CE1 C:PHE348 4.6 27.5 1.0
O A:HIS368 4.6 13.1 1.0
OE1 A:GLN371 4.7 16.3 1.0
CD A:GLN371 4.7 16.0 1.0
CZ C:PHE348 4.8 20.1 1.0
C A:HIS368 4.9 11.4 1.0
N A:HIS368 4.9 12.3 1.0
O A:SER366 4.9 14.6 1.0

Reference:

G.Kozlov, S.Mattijssen, J.Jiang, S.Nyandwi, T.Sprules, J.R.Iben, S.L.Coon, S.Gaidamakov, A.M.Noronha, C.J.Wilds, R.J.Maraia, K.Gehring. Structural Basis of 3'-End Poly(A) Rna Recognition By LARP1. Nucleic Acids Res. V. 50 9534 2022.
ISSN: ESSN 1362-4962
PubMed: 35979957
DOI: 10.1093/NAR/GKAC696
Page generated: Tue Apr 4 21:42:50 2023

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