Chlorine in PDB 7t0t: Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
Protein crystallography data
The structure of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562, PDB code: 7t0t
was solved by
D.A.Kuntz,
G.G.Prive,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
32.36 /
2.00
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
62.592,
102.549,
65.028,
90,
115.48,
90
|
|
R / Rfree (%)
|
18.1 /
21.9
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
(pdb code 7t0t). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562, PDB code: 7t0t:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 7t0t
Go back to
Chlorine Binding Sites List in 7t0t
Chlorine binding site 1 out
of 6 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl202
b:16.7
occ:1.00
|
CL19
|
A:E1I202
|
0.0
|
16.7
|
1.0
|
|
C18
|
A:E1I202
|
1.8
|
17.7
|
1.0
|
|
HB3
|
B:ASN21
|
2.6
|
19.1
|
1.0
|
|
C13
|
A:E1I202
|
2.7
|
18.8
|
1.0
|
|
C17
|
A:E1I202
|
2.7
|
16.9
|
1.0
|
|
HA
|
A:ALA52
|
2.8
|
16.6
|
1.0
|
|
N12
|
A:E1I202
|
3.0
|
16.6
|
1.0
|
|
HD21
|
B:LEU25
|
3.0
|
22.1
|
1.0
|
|
HG
|
B:LEU25
|
3.1
|
20.0
|
1.0
|
|
HD11
|
B:LEU25
|
3.2
|
22.1
|
1.0
|
|
O
|
A:MET51
|
3.2
|
13.8
|
1.0
|
|
HD1
|
A:TYR58
|
3.3
|
23.8
|
1.0
|
|
HB3
|
A:MET51
|
3.4
|
17.8
|
1.0
|
|
C
|
A:MET51
|
3.4
|
15.3
|
1.0
|
|
HB2
|
A:MET51
|
3.5
|
17.8
|
1.0
|
|
CA
|
A:ALA52
|
3.6
|
13.8
|
1.0
|
|
N
|
A:ALA52
|
3.6
|
12.9
|
1.0
|
|
CB
|
B:ASN21
|
3.6
|
15.9
|
1.0
|
|
CG
|
B:LEU25
|
3.7
|
16.6
|
1.0
|
|
CD2
|
B:LEU25
|
3.7
|
18.4
|
1.0
|
|
CD1
|
A:TYR58
|
3.8
|
19.7
|
1.0
|
|
CD1
|
B:LEU25
|
3.8
|
18.3
|
1.0
|
|
CB
|
A:MET51
|
3.9
|
14.7
|
1.0
|
|
HB2
|
A:ALA52
|
3.9
|
18.7
|
1.0
|
|
HE1
|
A:TYR58
|
3.9
|
26.8
|
1.0
|
|
O
|
B:ASN21
|
3.9
|
15.9
|
1.0
|
|
HD23
|
B:LEU25
|
3.9
|
22.1
|
1.0
|
|
N16
|
A:E1I202
|
4.0
|
22.3
|
1.0
|
|
HE2
|
A:MET51
|
4.0
|
28.1
|
1.0
|
|
C14
|
A:E1I202
|
4.0
|
16.5
|
1.0
|
|
H
|
A:ALA52
|
4.1
|
15.6
|
1.0
|
|
HB2
|
B:ASN21
|
4.1
|
19.1
|
1.0
|
|
CG
|
B:ASN21
|
4.1
|
17.7
|
1.0
|
|
CE1
|
A:TYR58
|
4.2
|
22.2
|
1.0
|
|
HD12
|
B:LEU25
|
4.2
|
22.1
|
1.0
|
|
CB
|
A:ALA52
|
4.3
|
15.5
|
1.0
|
|
C
|
B:ASN21
|
4.3
|
14.4
|
1.0
|
|
CA
|
A:MET51
|
4.3
|
14.4
|
1.0
|
|
C10
|
A:E1I202
|
4.3
|
18.7
|
1.0
|
|
CA
|
B:ASN21
|
4.4
|
15.3
|
1.0
|
|
HA
|
B:ASN21
|
4.4
|
18.4
|
1.0
|
|
HD22
|
B:ASN21
|
4.4
|
18.9
|
1.0
|
|
C15
|
A:E1I202
|
4.4
|
22.4
|
1.0
|
|
ND2
|
B:ASN21
|
4.5
|
15.7
|
1.0
|
|
HD22
|
B:LEU25
|
4.5
|
22.1
|
1.0
|
|
HB2
|
A:TYR58
|
4.5
|
23.7
|
1.0
|
|
HB1
|
A:ALA52
|
4.6
|
18.7
|
1.0
|
|
HD13
|
B:LEU25
|
4.7
|
22.1
|
1.0
|
|
HB2
|
B:ARG24
|
4.7
|
22.4
|
1.0
|
|
OD1
|
B:ASN21
|
4.7
|
17.2
|
1.0
|
|
C
|
A:ALA52
|
4.8
|
14.1
|
1.0
|
|
HH22
|
B:ARG28
|
4.8
|
29.4
|
0.5
|
|
HA
|
A:MET51
|
4.8
|
17.4
|
1.0
|
|
CG
|
A:TYR58
|
4.8
|
20.1
|
1.0
|
|
CE
|
A:MET51
|
4.9
|
23.3
|
1.0
|
|
O
|
A:THR48
|
5.0
|
12.7
|
1.0
|
|
H
|
B:LEU25
|
5.0
|
23.0
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 7t0t
Go back to
Chlorine Binding Sites List in 7t0t
Chlorine binding site 2 out
of 6 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl201
b:17.3
occ:1.00
|
CL19
|
B:E1I201
|
0.0
|
17.3
|
1.0
|
|
C18
|
B:E1I201
|
1.8
|
19.3
|
1.0
|
|
C13
|
B:E1I201
|
2.7
|
17.4
|
1.0
|
|
C17
|
B:E1I201
|
2.8
|
16.6
|
1.0
|
|
HB3
|
A:ASN21
|
2.8
|
15.9
|
1.0
|
|
N12
|
B:E1I201
|
2.9
|
16.4
|
1.0
|
|
HD21
|
A:LEU25
|
3.0
|
19.5
|
1.0
|
|
HA
|
B:ALA52
|
3.0
|
17.0
|
1.0
|
|
HD11
|
A:LEU25
|
3.0
|
22.1
|
1.0
|
|
HG
|
A:LEU25
|
3.2
|
15.8
|
1.0
|
|
HB3
|
B:MET51
|
3.3
|
18.8
|
1.0
|
|
O
|
B:MET51
|
3.3
|
15.7
|
1.0
|
|
C
|
B:MET51
|
3.5
|
13.3
|
1.0
|
|
CD2
|
A:LEU25
|
3.7
|
16.2
|
1.0
|
|
CG
|
A:LEU25
|
3.7
|
13.1
|
1.0
|
|
CD1
|
A:LEU25
|
3.7
|
18.3
|
1.0
|
|
HB2
|
B:MET51
|
3.7
|
18.8
|
1.0
|
|
CB
|
A:ASN21
|
3.8
|
13.1
|
1.0
|
|
CA
|
B:ALA52
|
3.8
|
14.1
|
1.0
|
|
N
|
B:ALA52
|
3.8
|
12.9
|
1.0
|
|
HD1
|
B:TYR58
|
3.9
|
23.8
|
1.0
|
|
CB
|
B:MET51
|
3.9
|
15.6
|
1.0
|
|
HE2
|
B:MET51
|
3.9
|
24.1
|
1.0
|
|
HD23
|
A:LEU25
|
3.9
|
19.5
|
1.0
|
|
N16
|
B:E1I201
|
4.0
|
19.2
|
1.0
|
|
O
|
A:ASN21
|
4.0
|
14.0
|
1.0
|
|
C14
|
B:E1I201
|
4.0
|
19.6
|
1.0
|
|
HD12
|
A:LEU25
|
4.1
|
22.1
|
1.0
|
|
CD1
|
B:TYR58
|
4.1
|
19.8
|
1.0
|
|
HB2
|
B:ALA52
|
4.2
|
18.2
|
1.0
|
|
C10
|
B:E1I201
|
4.3
|
16.8
|
1.0
|
|
HB2
|
A:ASN21
|
4.3
|
15.9
|
1.0
|
|
CG
|
A:ASN21
|
4.3
|
17.3
|
1.0
|
|
CA
|
B:MET51
|
4.3
|
14.0
|
1.0
|
|
HE1
|
B:TYR58
|
4.4
|
22.9
|
1.0
|
|
CE1
|
B:TYR58
|
4.4
|
19.0
|
1.0
|
|
H
|
B:ALA52
|
4.4
|
15.6
|
1.0
|
|
C
|
A:ASN21
|
4.4
|
13.5
|
1.0
|
|
HA
|
A:ASN21
|
4.4
|
17.4
|
1.0
|
|
C15
|
B:E1I201
|
4.4
|
18.6
|
1.0
|
|
HD22
|
A:LEU25
|
4.5
|
19.5
|
1.0
|
|
CA
|
A:ASN21
|
4.5
|
14.5
|
1.0
|
|
HD13
|
A:LEU25
|
4.5
|
22.1
|
1.0
|
|
HB2
|
B:TYR58
|
4.5
|
21.3
|
1.0
|
|
CB
|
B:ALA52
|
4.6
|
15.1
|
1.0
|
|
CG
|
B:TYR58
|
4.7
|
17.9
|
1.0
|
|
HD22
|
A:ASN21
|
4.7
|
19.6
|
1.0
|
|
ND2
|
A:ASN21
|
4.8
|
16.3
|
1.0
|
|
HA
|
B:MET51
|
4.8
|
16.9
|
1.0
|
|
CE
|
B:MET51
|
4.9
|
20.0
|
1.0
|
|
HB2
|
A:ARG24
|
4.9
|
17.5
|
1.0
|
|
OD1
|
A:ASN21
|
4.9
|
16.0
|
1.0
|
|
C
|
B:ALA52
|
4.9
|
13.4
|
1.0
|
|
HB1
|
B:ALA52
|
4.9
|
18.2
|
1.0
|
|
H
|
A:LEU25
|
5.0
|
15.2
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 7t0t
Go back to
Chlorine Binding Sites List in 7t0t
Chlorine binding site 3 out
of 6 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl201
b:16.4
occ:1.00
|
CL19
|
C:E1I201
|
0.0
|
16.4
|
1.0
|
|
C18
|
C:E1I201
|
1.8
|
15.8
|
1.0
|
|
C13
|
C:E1I201
|
2.7
|
16.2
|
1.0
|
|
C17
|
C:E1I201
|
2.7
|
15.2
|
1.0
|
|
N12
|
C:E1I201
|
2.9
|
15.9
|
1.0
|
|
HB3
|
D:ASN21
|
2.9
|
16.0
|
1.0
|
|
HA
|
C:ALA52
|
3.0
|
16.7
|
1.0
|
|
HD21
|
D:LEU25
|
3.1
|
19.4
|
1.0
|
|
HG
|
D:LEU25
|
3.1
|
20.0
|
1.0
|
|
HB3
|
C:MET51
|
3.2
|
18.2
|
1.0
|
|
HD11
|
D:LEU25
|
3.2
|
20.8
|
1.0
|
|
O
|
C:MET51
|
3.4
|
12.8
|
1.0
|
|
C
|
C:MET51
|
3.6
|
14.8
|
1.0
|
|
HE2
|
C:MET51
|
3.7
|
24.0
|
1.0
|
|
CG
|
D:LEU25
|
3.7
|
16.6
|
1.0
|
|
CD2
|
D:LEU25
|
3.7
|
16.1
|
1.0
|
|
N
|
C:ALA52
|
3.7
|
13.4
|
1.0
|
|
CA
|
C:ALA52
|
3.8
|
13.9
|
1.0
|
|
HB2
|
C:MET51
|
3.8
|
18.2
|
1.0
|
|
CD1
|
D:LEU25
|
3.9
|
17.2
|
1.0
|
|
HD23
|
D:LEU25
|
3.9
|
19.4
|
1.0
|
|
CB
|
D:ASN21
|
3.9
|
13.2
|
1.0
|
|
CB
|
C:MET51
|
3.9
|
15.1
|
1.0
|
|
O
|
D:ASN21
|
3.9
|
11.3
|
1.0
|
|
N16
|
C:E1I201
|
4.0
|
17.5
|
1.0
|
|
HD1
|
C:TYR58
|
4.0
|
20.5
|
1.0
|
|
C14
|
C:E1I201
|
4.0
|
17.0
|
1.0
|
|
CD1
|
C:TYR58
|
4.2
|
17.0
|
1.0
|
|
HB2
|
C:ALA52
|
4.2
|
16.4
|
1.0
|
|
H
|
C:ALA52
|
4.2
|
16.2
|
1.0
|
|
HD12
|
D:LEU25
|
4.2
|
20.8
|
1.0
|
|
HE1
|
C:TYR58
|
4.3
|
22.0
|
1.0
|
|
C10
|
C:E1I201
|
4.3
|
18.4
|
1.0
|
|
CE1
|
C:TYR58
|
4.3
|
18.2
|
1.0
|
|
CA
|
C:MET51
|
4.4
|
14.2
|
1.0
|
|
HB2
|
D:ASN21
|
4.4
|
16.0
|
1.0
|
|
C15
|
C:E1I201
|
4.4
|
16.0
|
1.0
|
|
C
|
D:ASN21
|
4.5
|
15.2
|
1.0
|
|
CG
|
D:ASN21
|
4.5
|
15.3
|
1.0
|
|
HA
|
D:ASN21
|
4.5
|
16.3
|
1.0
|
|
CB
|
C:ALA52
|
4.5
|
13.6
|
1.0
|
|
CA
|
D:ASN21
|
4.6
|
13.5
|
1.0
|
|
HD22
|
D:LEU25
|
4.6
|
19.4
|
1.0
|
|
CE
|
C:MET51
|
4.6
|
19.9
|
1.0
|
|
HD13
|
D:LEU25
|
4.6
|
20.8
|
1.0
|
|
HB2
|
C:TYR58
|
4.7
|
20.0
|
1.0
|
|
CG
|
C:TYR58
|
4.8
|
18.4
|
1.0
|
|
HA
|
C:MET51
|
4.8
|
17.2
|
1.0
|
|
HB2
|
D:ARG24
|
4.9
|
16.6
|
1.0
|
|
C
|
C:ALA52
|
4.9
|
15.2
|
1.0
|
|
HB1
|
C:ALA52
|
4.9
|
16.4
|
1.0
|
|
HD22
|
D:ASN21
|
4.9
|
20.7
|
1.0
|
|
ND2
|
D:ASN21
|
5.0
|
17.1
|
1.0
|
|
H
|
D:LEU25
|
5.0
|
17.4
|
1.0
|
|
OD1
|
D:ASN21
|
5.0
|
16.9
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 7t0t
Go back to
Chlorine Binding Sites List in 7t0t
Chlorine binding site 4 out
of 6 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl201
b:16.1
occ:0.97
|
CL19
|
D:E1I201
|
0.0
|
16.1
|
1.0
|
|
C18
|
D:E1I201
|
1.8
|
18.7
|
1.0
|
|
C13
|
D:E1I201
|
2.7
|
18.0
|
1.0
|
|
C17
|
D:E1I201
|
2.7
|
16.6
|
1.0
|
|
HA
|
D:ALA52
|
2.7
|
15.9
|
1.0
|
|
HB3
|
C:ASN21
|
2.8
|
16.5
|
1.0
|
|
N12
|
D:E1I201
|
3.0
|
16.9
|
1.0
|
|
HG
|
C:LEU25
|
3.1
|
20.1
|
1.0
|
|
HD21
|
C:LEU25
|
3.1
|
22.9
|
1.0
|
|
HD11
|
C:LEU25
|
3.2
|
22.3
|
1.0
|
|
HD1
|
D:TYR58
|
3.3
|
25.1
|
1.0
|
|
O
|
D:MET51
|
3.3
|
15.0
|
1.0
|
|
HB3
|
D:MET51
|
3.4
|
20.7
|
1.0
|
|
C
|
D:MET51
|
3.4
|
13.8
|
1.0
|
|
N
|
D:ALA52
|
3.5
|
13.7
|
1.0
|
|
HB2
|
D:MET51
|
3.5
|
20.7
|
1.0
|
|
CA
|
D:ALA52
|
3.5
|
13.2
|
1.0
|
|
CG
|
C:LEU25
|
3.7
|
16.6
|
1.0
|
|
CB
|
C:ASN21
|
3.8
|
13.7
|
1.0
|
|
CD2
|
C:LEU25
|
3.8
|
19.0
|
1.0
|
|
O
|
C:ASN21
|
3.8
|
17.0
|
1.0
|
|
HE1
|
D:TYR58
|
3.8
|
26.6
|
1.0
|
|
CD1
|
D:TYR58
|
3.8
|
20.9
|
1.0
|
|
CD1
|
C:LEU25
|
3.8
|
18.5
|
1.0
|
|
CB
|
D:MET51
|
3.8
|
17.1
|
1.0
|
|
HB2
|
D:ALA52
|
3.9
|
17.4
|
1.0
|
|
H
|
D:ALA52
|
3.9
|
16.6
|
1.0
|
|
N16
|
D:E1I201
|
4.0
|
18.2
|
1.0
|
|
C14
|
D:E1I201
|
4.0
|
17.6
|
1.0
|
|
HD23
|
C:LEU25
|
4.0
|
22.9
|
1.0
|
|
CE1
|
D:TYR58
|
4.1
|
22.1
|
1.0
|
|
HD12
|
C:LEU25
|
4.1
|
22.3
|
1.0
|
|
CG
|
C:ASN21
|
4.3
|
16.8
|
1.0
|
|
C
|
C:ASN21
|
4.3
|
16.0
|
1.0
|
|
CB
|
D:ALA52
|
4.3
|
14.4
|
1.0
|
|
CA
|
D:MET51
|
4.3
|
14.5
|
1.0
|
|
C10
|
D:E1I201
|
4.3
|
17.3
|
1.0
|
|
HB2
|
C:ASN21
|
4.4
|
16.5
|
1.0
|
|
HA
|
C:ASN21
|
4.4
|
16.1
|
1.0
|
|
C15
|
D:E1I201
|
4.4
|
20.0
|
1.0
|
|
CA
|
C:ASN21
|
4.4
|
13.3
|
1.0
|
|
HE2
|
D:MET51
|
4.5
|
25.1
|
1.0
|
|
HB2
|
D:TYR58
|
4.6
|
21.7
|
1.0
|
|
HD22
|
C:LEU25
|
4.6
|
22.9
|
1.0
|
|
HB1
|
D:ALA52
|
4.7
|
17.4
|
1.0
|
|
HD13
|
C:LEU25
|
4.7
|
22.3
|
1.0
|
|
C
|
D:ALA52
|
4.7
|
15.5
|
1.0
|
|
OD1
|
C:ASN21
|
4.7
|
17.3
|
1.0
|
|
ND2
|
C:ASN21
|
4.8
|
16.5
|
1.0
|
|
HD22
|
C:ASN21
|
4.8
|
19.9
|
1.0
|
|
HA
|
D:MET51
|
4.8
|
17.6
|
1.0
|
|
CG
|
D:TYR58
|
4.8
|
21.1
|
1.0
|
|
HB2
|
C:ARG24
|
4.8
|
22.7
|
1.0
|
|
O
|
D:THR48
|
4.9
|
14.8
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 7t0t
Go back to
Chlorine Binding Sites List in 7t0t
Chlorine binding site 5 out
of 6 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl201
b:14.0
occ:1.00
|
CL19
|
E:E1I201
|
0.0
|
14.0
|
1.0
|
|
C18
|
E:E1I201
|
1.8
|
15.6
|
1.0
|
|
C13
|
E:E1I201
|
2.6
|
15.9
|
1.0
|
|
HA
|
E:ALA52
|
2.8
|
16.5
|
1.0
|
|
C17
|
E:E1I201
|
2.8
|
17.3
|
1.0
|
|
N12
|
E:E1I201
|
2.8
|
14.0
|
1.0
|
|
HD21
|
F:LEU25
|
2.9
|
26.9
|
1.0
|
|
HB3
|
F:ASN21
|
2.9
|
17.4
|
1.0
|
|
HD2
|
E:TYR58
|
2.9
|
24.6
|
1.0
|
|
O
|
E:MET51
|
3.2
|
15.0
|
1.0
|
|
HE2
|
E:TYR58
|
3.2
|
25.1
|
1.0
|
|
HD11
|
F:LEU25
|
3.3
|
27.4
|
1.0
|
|
HG
|
F:LEU25
|
3.3
|
22.9
|
1.0
|
|
C
|
E:MET51
|
3.5
|
15.3
|
1.0
|
|
HB3
|
E:MET51
|
3.5
|
18.2
|
1.0
|
|
CA
|
E:ALA52
|
3.6
|
13.7
|
1.0
|
|
CD2
|
F:LEU25
|
3.6
|
22.3
|
1.0
|
|
N
|
E:ALA52
|
3.6
|
12.9
|
1.0
|
|
CD2
|
E:TYR58
|
3.6
|
20.4
|
1.0
|
|
HB2
|
E:MET51
|
3.7
|
18.2
|
1.0
|
|
CE2
|
E:TYR58
|
3.8
|
20.8
|
1.0
|
|
HD23
|
F:LEU25
|
3.8
|
26.9
|
1.0
|
|
CG
|
F:LEU25
|
3.8
|
19.0
|
1.0
|
|
CB
|
F:ASN21
|
3.9
|
14.4
|
1.0
|
|
C14
|
E:E1I201
|
4.0
|
15.9
|
1.0
|
|
N16
|
E:E1I201
|
4.0
|
14.3
|
1.0
|
|
CD1
|
F:LEU25
|
4.0
|
22.7
|
1.0
|
|
CB
|
E:MET51
|
4.0
|
15.1
|
1.0
|
|
HB2
|
E:ALA52
|
4.0
|
17.9
|
1.0
|
|
H
|
E:ALA52
|
4.2
|
15.6
|
1.0
|
|
O
|
F:ASN21
|
4.2
|
18.1
|
1.0
|
|
C10
|
E:E1I201
|
4.2
|
16.1
|
1.0
|
|
HE2
|
E:MET51
|
4.3
|
27.5
|
1.0
|
|
HB2
|
F:ASN21
|
4.3
|
17.4
|
1.0
|
|
CB
|
E:ALA52
|
4.3
|
14.8
|
1.0
|
|
CA
|
E:MET51
|
4.4
|
16.4
|
1.0
|
|
HD22
|
F:LEU25
|
4.4
|
26.9
|
1.0
|
|
HD12
|
F:LEU25
|
4.4
|
27.4
|
1.0
|
|
C15
|
E:E1I201
|
4.4
|
16.9
|
1.0
|
|
C
|
F:ASN21
|
4.5
|
16.6
|
1.0
|
|
H11
|
E:DMS202
|
4.5
|
32.7
|
0.9
|
|
CG
|
F:ASN21
|
4.5
|
15.2
|
1.0
|
|
HA
|
F:ASN21
|
4.6
|
18.3
|
1.0
|
|
CA
|
F:ASN21
|
4.6
|
15.2
|
1.0
|
|
HB1
|
E:ALA52
|
4.7
|
17.9
|
1.0
|
|
C
|
E:ALA52
|
4.7
|
15.4
|
1.0
|
|
HD22
|
F:ASN21
|
4.7
|
17.6
|
1.0
|
|
HD13
|
F:LEU25
|
4.7
|
27.4
|
1.0
|
|
ND2
|
F:ASN21
|
4.9
|
14.6
|
1.0
|
|
HB2
|
E:TYR58
|
4.9
|
23.5
|
1.0
|
|
HA
|
E:MET51
|
4.9
|
19.8
|
1.0
|
|
CG
|
E:TYR58
|
4.9
|
22.1
|
1.0
|
|
C09
|
E:E1I201
|
5.0
|
14.1
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 7t0t
Go back to
Chlorine Binding Sites List in 7t0t
Chlorine binding site 6 out
of 6 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cl201
b:18.0
occ:1.00
|
CL19
|
F:E1I201
|
0.0
|
18.0
|
1.0
|
|
C18
|
F:E1I201
|
1.8
|
20.6
|
1.0
|
|
C13
|
F:E1I201
|
2.7
|
18.5
|
1.0
|
|
C17
|
F:E1I201
|
2.8
|
21.0
|
1.0
|
|
HB3
|
E:ASN21
|
2.8
|
19.7
|
1.0
|
|
HA
|
F:ALA52
|
2.8
|
19.6
|
1.0
|
|
N12
|
F:E1I201
|
2.9
|
17.8
|
1.0
|
|
HD2
|
F:TYR58
|
2.9
|
26.8
|
1.0
|
|
HE2
|
F:TYR58
|
3.1
|
27.6
|
1.0
|
|
HD21
|
E:LEU25
|
3.2
|
26.4
|
1.0
|
|
O
|
F:MET51
|
3.3
|
16.7
|
1.0
|
|
HB3
|
F:MET51
|
3.3
|
20.2
|
1.0
|
|
HG
|
E:LEU25
|
3.4
|
24.6
|
1.0
|
|
HD11
|
E:LEU25
|
3.4
|
20.7
|
1.0
|
|
C
|
F:MET51
|
3.5
|
18.5
|
1.0
|
|
CD2
|
F:TYR58
|
3.6
|
22.2
|
1.0
|
|
CA
|
F:ALA52
|
3.6
|
16.2
|
1.0
|
|
HD23
|
E:LEU25
|
3.7
|
26.4
|
1.0
|
|
CE2
|
F:TYR58
|
3.7
|
22.9
|
1.0
|
|
N
|
F:ALA52
|
3.7
|
18.2
|
1.0
|
|
CB
|
E:ASN21
|
3.7
|
16.4
|
1.0
|
|
CD2
|
E:LEU25
|
3.7
|
21.9
|
1.0
|
|
HB2
|
F:MET51
|
3.9
|
20.2
|
1.0
|
|
CG
|
E:LEU25
|
3.9
|
20.5
|
1.0
|
|
CB
|
F:MET51
|
3.9
|
16.8
|
1.0
|
|
C14
|
F:E1I201
|
4.0
|
19.2
|
1.0
|
|
N16
|
F:E1I201
|
4.0
|
22.2
|
1.0
|
|
HB2
|
F:ALA52
|
4.1
|
17.4
|
1.0
|
|
CD1
|
E:LEU25
|
4.1
|
17.1
|
1.0
|
|
O
|
E:ASN21
|
4.1
|
17.3
|
1.0
|
|
HE2
|
F:MET51
|
4.2
|
28.8
|
1.0
|
|
HB2
|
E:ASN21
|
4.2
|
19.7
|
1.0
|
|
H
|
F:ALA52
|
4.3
|
21.9
|
1.0
|
|
C10
|
F:E1I201
|
4.3
|
18.7
|
1.0
|
|
CG
|
E:ASN21
|
4.4
|
17.8
|
1.0
|
|
CA
|
F:MET51
|
4.4
|
16.1
|
1.0
|
|
CB
|
F:ALA52
|
4.4
|
14.4
|
1.0
|
|
C
|
E:ASN21
|
4.4
|
17.1
|
1.0
|
|
C15
|
F:E1I201
|
4.4
|
21.5
|
1.0
|
|
HA
|
E:ASN21
|
4.5
|
22.8
|
1.0
|
|
CA
|
E:ASN21
|
4.5
|
18.9
|
1.0
|
|
HD12
|
E:LEU25
|
4.5
|
20.7
|
1.0
|
|
HD22
|
E:ASN21
|
4.6
|
18.1
|
1.0
|
|
HB3
|
E:ARG24
|
4.6
|
32.6
|
1.0
|
|
HD22
|
E:LEU25
|
4.7
|
26.4
|
1.0
|
|
ND2
|
E:ASN21
|
4.7
|
15.0
|
1.0
|
|
HB1
|
F:ALA52
|
4.7
|
17.4
|
1.0
|
|
C
|
F:ALA52
|
4.7
|
15.6
|
1.0
|
|
HA
|
F:MET51
|
4.8
|
19.4
|
1.0
|
|
HD13
|
E:LEU25
|
4.9
|
20.7
|
1.0
|
|
CG
|
F:TYR58
|
4.9
|
22.6
|
1.0
|
|
HB2
|
F:TYR58
|
4.9
|
23.2
|
1.0
|
|
OD1
|
E:ASN21
|
5.0
|
16.4
|
1.0
|
|
Reference:
D.A.Kuntz,
G.G.Prive.
Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-10562 To Be Published.
Page generated: Tue Jul 30 04:22:25 2024
|
