Chlorine in PDB 7uj2: Ospc Type K

Protein crystallography data

The structure of Ospc Type K, PDB code: 7uj2 was solved by M.J.Rudolph, N.Mantis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.80 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.931, 44.085, 68.806, 90, 103.83, 90
R / Rfree (%) 14.7 / 16.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ospc Type K (pdb code 7uj2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Ospc Type K, PDB code: 7uj2:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7uj2

Go back to Chlorine Binding Sites List in 7uj2
Chlorine binding site 1 out of 3 in the Ospc Type K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ospc Type K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:77.9
occ:1.00
HZ1 A:LYS137 2.1 40.9 1.0
O A:HOH515 2.6 52.5 1.0
NZ A:LYS137 3.0 34.1 1.0
HD21 A:ASN141 3.0 24.7 1.0
HD2 A:LYS137 3.2 23.5 1.0
HZ3 A:LYS137 3.4 40.9 1.0
HZ2 A:LYS137 3.5 40.9 1.0
HE3 A:LYS137 3.5 36.9 1.0
HB3 A:ASP140 3.5 22.8 1.0
CE A:LYS137 3.6 30.8 1.0
ND2 A:ASN141 3.6 20.6 1.0
CD A:LYS137 3.8 19.6 1.0
HB2 A:ASP140 3.9 22.8 1.0
HD22 A:ASN141 4.0 24.7 1.0
O A:HOH405 4.0 34.8 1.0
CB A:ASP140 4.2 19.0 1.0
HD3 A:LYS137 4.3 23.5 1.0
CG A:ASN141 4.4 22.0 1.0
OD1 A:ASN141 4.4 22.3 1.0
HE2 A:LYS137 4.6 36.9 1.0
HA A:LYS137 4.6 17.1 1.0
OD2 A:ASP140 4.7 29.8 1.0
CG A:ASP140 4.9 21.5 1.0
HG3 A:LYS137 5.0 21.4 1.0

Chlorine binding site 2 out of 3 in 7uj2

Go back to Chlorine Binding Sites List in 7uj2
Chlorine binding site 2 out of 3 in the Ospc Type K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Ospc Type K within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:50.5
occ:1.00
O B:HOH429 2.6 26.3 1.0
O B:HOH530 2.7 17.5 1.0
HD12 B:ILE147 2.9 18.4 0.5
HD13 B:ILE147 2.9 18.4 0.5
HD11 B:ILE147 2.9 18.4 0.5
CD1 B:ILE147 3.1 15.3 0.5
O B:HOH518 3.1 21.9 1.0
HG12 B:ILE147 3.7 18.7 0.5
HD11 B:ILE147 3.8 13.2 0.5
HD13 B:ILE147 3.8 13.2 0.5
O B:HOH452 4.2 17.1 1.0
CD1 B:ILE147 4.2 11.0 0.5
HA B:GLN144 4.4 16.9 1.0
CG1 B:ILE147 4.4 15.6 0.5
HG2 B:GLN144 4.4 31.7 1.0
O B:ALA143 4.4 15.8 1.0
O B:HOH516 4.5 30.7 1.0
CG1 B:ILE147 4.5 13.5 0.5
HG21 B:ILE147 4.6 21.7 0.5
O B:HOH470 4.8 13.3 1.0
HG13 B:ILE147 4.9 16.2 0.5
HG12 B:ILE147 4.9 16.2 0.5
HG13 B:ILE147 5.0 18.7 0.5

Chlorine binding site 3 out of 3 in 7uj2

Go back to Chlorine Binding Sites List in 7uj2
Chlorine binding site 3 out of 3 in the Ospc Type K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Ospc Type K within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:66.1
occ:1.00
O B:HOH491 2.9 39.5 1.0
O B:HOH477 3.0 21.6 1.0
HD23 B:LEU114 3.5 54.9 1.0
HE3 B:LYS113 3.5 103.3 1.0
O B:HOH405 3.5 43.2 1.0
HB2 B:ALA58 3.6 22.8 1.0
HD21 B:LEU114 3.6 54.9 1.0
HB3 B:LYS113 3.7 33.7 1.0
HB1 B:ALA58 3.7 22.8 1.0
HB2 B:LYS113 3.9 33.7 1.0
CD2 B:LEU114 4.0 45.7 1.0
CB B:ALA58 4.1 19.0 1.0
CB B:LYS113 4.3 28.1 1.0
CE B:LYS113 4.5 86.1 1.0
O B:LYS113 4.5 35.9 1.0
HB3 B:ALA58 4.6 22.8 1.0
HD22 B:LEU114 4.6 54.9 1.0
HD2 B:LYS113 4.7 82.3 1.0
HG B:LEU114 4.8 38.3 1.0
C B:LYS113 4.8 34.4 1.0
O B:HOH427 4.9 23.4 1.0
HE2 B:LYS113 4.9 103.3 1.0
O B:HOH443 5.0 27.6 1.0
HZ3 B:LYS113 5.0 111.8 1.0

Reference:

M.J.Rudolph, N.Mantis. Structural Analysis of B5-OSPC_A Complex To Be Published.
Page generated: Tue Apr 11 13:09:15 2023

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