Chlorine in PDB 7uj2: Ospc Type K
Protein crystallography data
The structure of Ospc Type K, PDB code: 7uj2
was solved by
M.J.Rudolph,
N.Mantis,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
36.80 /
1.50
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
42.931,
44.085,
68.806,
90,
103.83,
90
|
R / Rfree (%)
|
14.7 /
16.7
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Ospc Type K
(pdb code 7uj2). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Ospc Type K, PDB code: 7uj2:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7uj2
Go back to
Chlorine Binding Sites List in 7uj2
Chlorine binding site 1 out
of 3 in the Ospc Type K
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Ospc Type K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:77.9
occ:1.00
|
HZ1
|
A:LYS137
|
2.1
|
40.9
|
1.0
|
O
|
A:HOH515
|
2.6
|
52.5
|
1.0
|
NZ
|
A:LYS137
|
3.0
|
34.1
|
1.0
|
HD21
|
A:ASN141
|
3.0
|
24.7
|
1.0
|
HD2
|
A:LYS137
|
3.2
|
23.5
|
1.0
|
HZ3
|
A:LYS137
|
3.4
|
40.9
|
1.0
|
HZ2
|
A:LYS137
|
3.5
|
40.9
|
1.0
|
HE3
|
A:LYS137
|
3.5
|
36.9
|
1.0
|
HB3
|
A:ASP140
|
3.5
|
22.8
|
1.0
|
CE
|
A:LYS137
|
3.6
|
30.8
|
1.0
|
ND2
|
A:ASN141
|
3.6
|
20.6
|
1.0
|
CD
|
A:LYS137
|
3.8
|
19.6
|
1.0
|
HB2
|
A:ASP140
|
3.9
|
22.8
|
1.0
|
HD22
|
A:ASN141
|
4.0
|
24.7
|
1.0
|
O
|
A:HOH405
|
4.0
|
34.8
|
1.0
|
CB
|
A:ASP140
|
4.2
|
19.0
|
1.0
|
HD3
|
A:LYS137
|
4.3
|
23.5
|
1.0
|
CG
|
A:ASN141
|
4.4
|
22.0
|
1.0
|
OD1
|
A:ASN141
|
4.4
|
22.3
|
1.0
|
HE2
|
A:LYS137
|
4.6
|
36.9
|
1.0
|
HA
|
A:LYS137
|
4.6
|
17.1
|
1.0
|
OD2
|
A:ASP140
|
4.7
|
29.8
|
1.0
|
CG
|
A:ASP140
|
4.9
|
21.5
|
1.0
|
HG3
|
A:LYS137
|
5.0
|
21.4
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7uj2
Go back to
Chlorine Binding Sites List in 7uj2
Chlorine binding site 2 out
of 3 in the Ospc Type K
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Ospc Type K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl301
b:50.5
occ:1.00
|
O
|
B:HOH429
|
2.6
|
26.3
|
1.0
|
O
|
B:HOH530
|
2.7
|
17.5
|
1.0
|
HD12
|
B:ILE147
|
2.9
|
18.4
|
0.5
|
HD13
|
B:ILE147
|
2.9
|
18.4
|
0.5
|
HD11
|
B:ILE147
|
2.9
|
18.4
|
0.5
|
CD1
|
B:ILE147
|
3.1
|
15.3
|
0.5
|
O
|
B:HOH518
|
3.1
|
21.9
|
1.0
|
HG12
|
B:ILE147
|
3.7
|
18.7
|
0.5
|
HD11
|
B:ILE147
|
3.8
|
13.2
|
0.5
|
HD13
|
B:ILE147
|
3.8
|
13.2
|
0.5
|
O
|
B:HOH452
|
4.2
|
17.1
|
1.0
|
CD1
|
B:ILE147
|
4.2
|
11.0
|
0.5
|
HA
|
B:GLN144
|
4.4
|
16.9
|
1.0
|
CG1
|
B:ILE147
|
4.4
|
15.6
|
0.5
|
HG2
|
B:GLN144
|
4.4
|
31.7
|
1.0
|
O
|
B:ALA143
|
4.4
|
15.8
|
1.0
|
O
|
B:HOH516
|
4.5
|
30.7
|
1.0
|
CG1
|
B:ILE147
|
4.5
|
13.5
|
0.5
|
HG21
|
B:ILE147
|
4.6
|
21.7
|
0.5
|
O
|
B:HOH470
|
4.8
|
13.3
|
1.0
|
HG13
|
B:ILE147
|
4.9
|
16.2
|
0.5
|
HG12
|
B:ILE147
|
4.9
|
16.2
|
0.5
|
HG13
|
B:ILE147
|
5.0
|
18.7
|
0.5
|
|
Chlorine binding site 3 out
of 3 in 7uj2
Go back to
Chlorine Binding Sites List in 7uj2
Chlorine binding site 3 out
of 3 in the Ospc Type K
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Ospc Type K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl302
b:66.1
occ:1.00
|
O
|
B:HOH491
|
2.9
|
39.5
|
1.0
|
O
|
B:HOH477
|
3.0
|
21.6
|
1.0
|
HD23
|
B:LEU114
|
3.5
|
54.9
|
1.0
|
HE3
|
B:LYS113
|
3.5
|
103.3
|
1.0
|
O
|
B:HOH405
|
3.5
|
43.2
|
1.0
|
HB2
|
B:ALA58
|
3.6
|
22.8
|
1.0
|
HD21
|
B:LEU114
|
3.6
|
54.9
|
1.0
|
HB3
|
B:LYS113
|
3.7
|
33.7
|
1.0
|
HB1
|
B:ALA58
|
3.7
|
22.8
|
1.0
|
HB2
|
B:LYS113
|
3.9
|
33.7
|
1.0
|
CD2
|
B:LEU114
|
4.0
|
45.7
|
1.0
|
CB
|
B:ALA58
|
4.1
|
19.0
|
1.0
|
CB
|
B:LYS113
|
4.3
|
28.1
|
1.0
|
CE
|
B:LYS113
|
4.5
|
86.1
|
1.0
|
O
|
B:LYS113
|
4.5
|
35.9
|
1.0
|
HB3
|
B:ALA58
|
4.6
|
22.8
|
1.0
|
HD22
|
B:LEU114
|
4.6
|
54.9
|
1.0
|
HD2
|
B:LYS113
|
4.7
|
82.3
|
1.0
|
HG
|
B:LEU114
|
4.8
|
38.3
|
1.0
|
C
|
B:LYS113
|
4.8
|
34.4
|
1.0
|
O
|
B:HOH427
|
4.9
|
23.4
|
1.0
|
HE2
|
B:LYS113
|
4.9
|
103.3
|
1.0
|
O
|
B:HOH443
|
5.0
|
27.6
|
1.0
|
HZ3
|
B:LYS113
|
5.0
|
111.8
|
1.0
|
|
Reference:
M.J.Rudolph,
N.Mantis.
Structural Analysis of B5-OSPC_A Complex To Be Published.
Page generated: Tue Jul 30 05:04:25 2024
|