Chlorine in PDB 7v03: Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis

Protein crystallography data

The structure of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis, PDB code: 7v03 was solved by G.Jones, C.Vickers, W.Patrick, G.Jameson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.94 / 1.78
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.102, 130.132, 74.998, 90, 90.01, 90
R / Rfree (%) 21.1 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis (pdb code 7v03). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis, PDB code: 7v03:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 7v03

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Chlorine binding site 1 out of 6 in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:10.5
occ:1.00
 OE2 A:GLU166 3.1 13.1 1.0
O A:HOH435 3.1 25.2 1.0
NE2 A:HIS96 3.3 7.5 1.0
ND2 A:ASN10 3.5 5.9 1.0
CB A:ASN10 3.6 4.4 1.0
OE1 A:GLU166 3.6 17.0 1.0
CD A:GLU166 3.8 16.7 1.0
CG A:LEU231 3.8 7.6 1.0
CE A:LYS12 3.8 10.2 1.0
CD2 A:LEU231 3.9 9.7 1.0
CD2 A:HIS96 3.9 7.6 1.0
CA A:GLY233 4.0 7.1 1.0
N A:GLY233 4.0 6.8 1.0
CG A:ASN10 4.0 7.3 1.0
C A:VAL232 4.1 7.4 1.0
O A:VAL232 4.2 8.6 1.0
NZ A:LYS12 4.4 7.4 1.0
CE1 A:HIS96 4.4 8.1 1.0
O A:LEU231 4.6 7.8 1.0
CD1 A:LEU231 4.6 10.1 1.0
C A:LEU231 4.6 8.0 1.0
N A:VAL232 4.7 6.7 1.0
CB A:LEU231 4.8 12.2 1.0
CA A:ASN10 5.0 6.5 1.0
CA A:VAL232 5.0 6.2 1.0

Chlorine binding site 2 out of 6 in 7v03

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Chlorine binding site 2 out of 6 in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:17.0
occ:1.00
 O A:HOH426 3.0 18.9 1.0
O A:HOH435 3.1 25.2 1.0
N A:SER212 3.1 10.3 1.0
N A:GLY172 3.3 7.0 1.0
CA A:ILE171 3.9 8.5 1.0
CA A:SER212 3.9 10.4 1.0
O A:ALA170 3.9 8.8 1.0
CA A:GLY211 3.9 9.2 1.0
O A:HOH578 4.0 13.3 1.0
C A:GLY211 4.0 10.9 1.0
C A:ILE171 4.1 6.1 1.0
CA A:GLY172 4.1 8.9 1.0
O A:HOH530 4.2 14.9 1.0
OG A:SER212 4.3 9.9 1.0
CA A:GLY233 4.5 7.1 1.0
N A:GLY211 4.5 6.1 1.0
O A:HOH516 4.6 14.8 1.0
CG2 A:ILE171 4.7 13.2 1.0
N A:GLY233 4.7 6.8 1.0
O A:HOH547 4.7 14.6 1.0
NZ A:LYS12 4.7 7.4 1.0
CB A:ILE171 4.8 8.6 1.0
N A:GLY234 4.8 10.2 1.0
CB A:SER212 4.8 12.5 1.0
C A:ALA170 4.8 8.2 1.0
N A:ILE171 4.9 7.9 1.0

Chlorine binding site 3 out of 6 in 7v03

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Chlorine binding site 3 out of 6 in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:29.1
occ:1.00
 OG1 A:THR140 3.5 11.6 1.0
O A:HOH520 3.7 25.4 1.0
CB A:THR140 3.9 15.1 1.0
O A:HOH557 4.0 11.4 1.0
O A:ARG135 4.0 12.6 1.0
O A:HOH603 4.0 26.3 1.0
CA A:GLY138 4.1 13.1 1.0
CG A:ARG135 4.4 13.6 1.0
NH1 A:ARG135 4.4 13.5 1.0
C A:GLY138 4.5 13.5 1.0
N A:THR140 4.5 9.7 1.0
CZ A:ARG135 4.8 12.9 1.0
O A:GLY138 4.8 13.2 1.0
N A:ALA139 4.8 11.1 1.0
C A:ARG135 4.9 9.7 1.0
N A:GLY138 4.9 9.9 1.0
CA A:THR140 4.9 9.6 1.0
CA A:ARG135 4.9 10.4 1.0
CG2 A:THR140 5.0 8.3 1.0

Chlorine binding site 4 out of 6 in 7v03

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Chlorine binding site 4 out of 6 in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:18.8
occ:1.00
 O B:HOH438 3.0 24.0 1.0
NE2 B:HIS96 3.2 13.6 1.0
O B:HOH409 3.3 21.1 1.0
ND2 B:ASN10 3.4 11.9 1.0
CB B:ASN10 3.7 12.1 1.0
CE B:LYS12 3.7 15.1 1.0
CG B:LEU231 3.9 13.8 1.0
CD2 B:HIS96 3.9 11.4 1.0
CA B:GLY233 4.0 13.1 1.0
CG B:ASN10 4.0 11.3 1.0
CD2 B:LEU231 4.1 10.8 1.0
O B:VAL232 4.2 13.5 1.0
N B:GLY233 4.2 9.9 1.0
CE1 B:HIS96 4.2 11.6 1.0
OE1 B:GLU166 4.2 22.1 1.0
NZ B:LYS12 4.2 15.3 1.0
C B:VAL232 4.3 14.9 1.0
O B:LEU231 4.4 11.2 1.0
O B:HOH486 4.6 16.2 1.0
CD1 B:LEU231 4.7 14.2 1.0
C B:LEU231 4.7 8.8 1.0
O B:HOH480 4.8 20.4 1.0
CB B:LEU231 4.9 13.3 1.0
N B:VAL232 4.9 7.9 1.0
O B:HOH447 5.0 25.6 1.0

Chlorine binding site 5 out of 6 in 7v03

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Chlorine binding site 5 out of 6 in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:8.2
occ:1.00
 O C:HOH496 2.8 16.9 1.0
OE2 C:GLU166 3.1 13.9 1.0
NE2 C:HIS96 3.2 7.7 1.0
ND2 C:ASN10 3.4 7.4 1.0
OE1 C:GLU166 3.4 14.1 1.0
CD C:GLU166 3.6 11.5 1.0
CB C:ASN10 3.7 6.3 1.0
CG C:LEU231 3.8 5.4 1.0
CD2 C:HIS96 3.8 9.9 1.0
CD2 C:LEU231 4.0 14.3 1.0
CE C:LYS12 4.0 10.7 1.0
CG C:ASN10 4.0 7.3 1.0
CA C:GLY233 4.1 8.9 1.0
N C:GLY233 4.2 8.3 1.0
C C:VAL232 4.3 7.1 1.0
CE1 C:HIS96 4.4 7.7 1.0
O C:VAL232 4.4 7.3 1.0
NZ C:LYS12 4.4 7.9 1.0
CD1 C:LEU231 4.5 7.7 1.0
O C:LEU231 4.7 6.6 1.0
C C:LEU231 4.8 5.4 1.0
CB C:LEU231 4.9 8.7 1.0
N C:VAL232 4.9 6.4 1.0

Chlorine binding site 6 out of 6 in 7v03

Go back to Chlorine Binding Sites List in 7v03
Chlorine binding site 6 out of 6 in the Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:15.7
occ:1.00
 O C:HOH471 2.7 16.5 1.0
O C:HOH572 2.9 20.0 1.0
N C:SER212 3.1 9.7 1.0
O C:HOH496 3.2 16.9 1.0
N C:GLY172 3.2 10.8 1.0
CA C:GLY211 3.9 6.2 1.0
CA C:ILE171 3.9 7.5 1.0
O C:ALA170 3.9 8.2 1.0
C C:GLY211 4.0 9.5 1.0
CA C:SER212 4.0 8.2 1.0
C C:ILE171 4.0 8.9 1.0
CA C:GLY172 4.1 10.0 1.0
O C:HOH571 4.2 18.0 1.0
OG C:SER212 4.4 9.6 1.0
N C:GLY211 4.5 6.1 1.0
CG2 C:ILE171 4.5 9.4 1.0
CA C:GLY233 4.5 8.9 1.0
O C:HOH535 4.7 14.8 1.0
CB C:ILE171 4.7 7.6 1.0
N C:GLY233 4.7 8.3 1.0
NZ C:LYS12 4.7 7.9 1.0
N C:GLY234 4.7 12.7 1.0
C C:ALA170 4.8 8.7 1.0
N C:ILE171 4.8 7.2 1.0
CB C:SER212 4.9 8.8 1.0

Reference:

G.Jones, C.Vickers, W.Patrick. Crystal Structure of Cytoplasmic Triosephosphate Isomerase From Cuscuta Australis To Be Published.
Page generated: Wed Jul 26 15:08:08 2023

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