Chlorine in PDB 7vob: The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S

Protein crystallography data

The structure of The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S, PDB code: 7vob was solved by X.L.Hou, J.H.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.18 / 2.09
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 164.293, 164.293, 157.324, 90, 90, 90
R / Rfree (%) 22.3 / 23.7

Other elements in 7vob:

The structure of The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S also contains other interesting chemical elements:

Iron (Fe) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S (pdb code 7vob). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S, PDB code: 7vob:

Chlorine binding site 1 out of 1 in 7vob

Go back to Chlorine Binding Sites List in 7vob
Chlorine binding site 1 out of 1 in the The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of A Radical Sam Enzyme Blse Involved in the Biosynthesis of Blasticidin S within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl410

b:53.4
occ:1.00
O C:HOH631 3.0 57.0 1.0
O C:HOH607 3.1 49.7 1.0
O C:HOH583 3.1 55.6 1.0
NH1 C:ARG340 3.3 50.8 1.0
NH2 C:ARG340 3.3 49.2 1.0
N C:GLY227 3.4 47.0 1.0
CZ C:ARG340 3.7 51.2 1.0
CA C:LEU226 3.9 48.1 1.0
C C:LEU226 4.1 53.0 1.0
CB C:LEU226 4.3 46.6 1.0
CD2 C:LEU226 4.3 47.0 1.0
CA C:GLY227 4.3 47.5 1.0
NE2 C:GLN343 4.4 46.5 1.0
O C:HOH529 4.5 54.5 1.0
O C:HOH601 4.5 51.9 1.0
O C:HOH552 4.6 45.2 1.0
CG C:GLN343 4.7 42.7 1.0
CD C:GLN343 4.8 51.3 1.0
O C:HOH561 4.9 55.9 1.0
CG C:LEU226 5.0 49.5 1.0

Reference:

Y.H.Lee, X.Hou, R.Chen, J.Feng, X.Liu, M.W.Ruszczycky, J.M.Gao, B.Wang, J.Zhou, H.W.Liu. Radical S -Adenosyl Methionine Enzyme Blse Catalyzes A Radical-Mediated 1,2-Diol Dehydration During the Biosynthesis of Blasticidin S. J.Am.Chem.Soc. V. 144 4478 2022.
ISSN: ESSN 1520-5126
PubMed: 35238201
DOI: 10.1021/JACS.1C12010
Page generated: Tue Jul 30 05:24:58 2024

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