Chlorine in PDB 7vre: The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892

Enzymatic activity of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892

All present enzymatic activity of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892:
2.7.10.1;

Protein crystallography data

The structure of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892, PDB code: 7vre was solved by S.J.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.85 / 2.51
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 146.246, 146.246, 146.246, 90, 90, 90
R / Rfree (%) 19.9 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892 (pdb code 7vre). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892, PDB code: 7vre:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7vre

Go back to Chlorine Binding Sites List in 7vre
Chlorine binding site 1 out of 2 in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:65.5
occ:1.00
CL1 A:7VH1101 0.0 65.5 1.0
C02 A:7VH1101 1.8 56.6 1.0
C03 A:7VH1101 2.8 58.6 1.0
C30 A:7VH1101 2.8 56.3 1.0
C32 A:7VH1101 3.2 63.8 1.0
C31 A:7VH1101 3.3 60.9 1.0
CB A:MET790 3.9 58.5 1.0
CB A:ALA743 3.9 52.1 1.0
N29 A:7VH1101 4.0 57.1 1.0
N04 A:7VH1101 4.0 56.4 1.0
CD1 A:LEU844 4.1 57.7 1.0
SG A:CYS775 4.2 82.4 1.0
SD A:MET790 4.2 80.1 1.0
CG A:MET790 4.4 70.7 1.0
CE A:MET790 4.4 67.0 1.0
O A:GLN791 4.4 54.8 1.0
OG1 A:THR854 4.4 69.4 1.0
N33 A:7VH1101 4.4 74.0 1.0
C05 A:7VH1101 4.4 56.3 1.0
C44 A:7VH1101 4.6 65.3 1.0
NZ A:LYS745 4.8 85.9 1.0

Chlorine binding site 2 out of 2 in 7vre

Go back to Chlorine Binding Sites List in 7vre
Chlorine binding site 2 out of 2 in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:70.3
occ:1.00
CL2 A:7VH1101 0.0 70.3 1.0
C09 A:7VH1101 1.8 62.2 1.0
C08 A:7VH1101 2.8 59.5 1.0
C11 A:7VH1101 2.8 65.9 1.0
N12 A:7VH1101 3.2 76.6 1.0
C24 A:7VH1101 3.3 80.5 1.0
N A:SER797 4.0 57.4 0.9
C07 A:7VH1101 4.1 59.9 1.0
C42 A:7VH1101 4.1 69.2 1.0
C23 A:7VH1101 4.1 85.5 1.0
C25 A:7VH1101 4.2 65.5 1.0
C43 A:7VH1101 4.2 64.2 1.0
OD2 A:ASP800 4.4 79.7 1.0
CA A:GLY796 4.4 53.6 1.0
CB A:SER797 4.4 57.5 1.0
C13 A:7VH1101 4.6 76.5 1.0
C A:GLY796 4.6 52.2 1.0
C26 A:7VH1101 4.6 62.1 1.0
C41 A:7VH1101 4.8 71.1 1.0
CA A:SER797 4.8 55.8 0.9
OG A:SER797 4.9 61.8 1.0
C44 A:7VH1101 4.9 65.3 1.0

Reference:

H.Chen, M.Lai, T.Zhang, Y.Chen, L.Tong, S.Zhu, Y.Zhou, X.Ren, J.Ding, H.Xie, X.Lu, K.Ding. Conformational Constrained 4-(1-Sulfonyl-3-Indol)Yl-2-Phenylaminopyrimidine Derivatives As New Fourth-Generation Epidermal Growth Factor Receptor Inhibitors Targeting T790M/C797S Mutations. J.Med.Chem. V. 65 6840 2022.
ISSN: ISSN 0022-2623
PubMed: 35446588
DOI: 10.1021/ACS.JMEDCHEM.2C00168
Page generated: Tue Apr 4 22:07:04 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy