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Chlorine in PDB 7vre: The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892

Enzymatic activity of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892

All present enzymatic activity of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892:
2.7.10.1;

Protein crystallography data

The structure of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892, PDB code: 7vre was solved by S.J.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.85 / 2.51
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 146.246, 146.246, 146.246, 90, 90, 90
R / Rfree (%) 19.9 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892 (pdb code 7vre). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892, PDB code: 7vre:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7vre

Go back to Chlorine Binding Sites List in 7vre
Chlorine binding site 1 out of 2 in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:65.5
occ:1.00
CL1 A:7VH1101 0.0 65.5 1.0
C02 A:7VH1101 1.8 56.6 1.0
C03 A:7VH1101 2.8 58.6 1.0
C30 A:7VH1101 2.8 56.3 1.0
C32 A:7VH1101 3.2 63.8 1.0
C31 A:7VH1101 3.3 60.9 1.0
CB A:MET790 3.9 58.5 1.0
CB A:ALA743 3.9 52.1 1.0
N29 A:7VH1101 4.0 57.1 1.0
N04 A:7VH1101 4.0 56.4 1.0
CD1 A:LEU844 4.1 57.7 1.0
SG A:CYS775 4.2 82.4 1.0
SD A:MET790 4.2 80.1 1.0
CG A:MET790 4.4 70.7 1.0
CE A:MET790 4.4 67.0 1.0
O A:GLN791 4.4 54.8 1.0
OG1 A:THR854 4.4 69.4 1.0
N33 A:7VH1101 4.4 74.0 1.0
C05 A:7VH1101 4.4 56.3 1.0
C44 A:7VH1101 4.6 65.3 1.0
NZ A:LYS745 4.8 85.9 1.0

Chlorine binding site 2 out of 2 in 7vre

Go back to Chlorine Binding Sites List in 7vre
Chlorine binding site 2 out of 2 in the The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Egfr T790M/C797S with the Inhibitor HCD2892 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:70.3
occ:1.00
CL2 A:7VH1101 0.0 70.3 1.0
C09 A:7VH1101 1.8 62.2 1.0
C08 A:7VH1101 2.8 59.5 1.0
C11 A:7VH1101 2.8 65.9 1.0
N12 A:7VH1101 3.2 76.6 1.0
C24 A:7VH1101 3.3 80.5 1.0
N A:SER797 4.0 57.4 0.9
C07 A:7VH1101 4.1 59.9 1.0
C42 A:7VH1101 4.1 69.2 1.0
C23 A:7VH1101 4.1 85.5 1.0
C25 A:7VH1101 4.2 65.5 1.0
C43 A:7VH1101 4.2 64.2 1.0
OD2 A:ASP800 4.4 79.7 1.0
CA A:GLY796 4.4 53.6 1.0
CB A:SER797 4.4 57.5 1.0
C13 A:7VH1101 4.6 76.5 1.0
C A:GLY796 4.6 52.2 1.0
C26 A:7VH1101 4.6 62.1 1.0
C41 A:7VH1101 4.8 71.1 1.0
CA A:SER797 4.8 55.8 0.9
OG A:SER797 4.9 61.8 1.0
C44 A:7VH1101 4.9 65.3 1.0

Reference:

H.Chen, M.Lai, T.Zhang, Y.Chen, L.Tong, S.Zhu, Y.Zhou, X.Ren, J.Ding, H.Xie, X.Lu, K.Ding. Conformational Constrained 4-(1-Sulfonyl-3-Indol)Yl-2-Phenylaminopyrimidine Derivatives As New Fourth-Generation Epidermal Growth Factor Receptor Inhibitors Targeting T790M/C797S Mutations. J.Med.Chem. V. 65 6840 2022.
ISSN: ISSN 0022-2623
PubMed: 35446588
DOI: 10.1021/ACS.JMEDCHEM.2C00168
Page generated: Tue Jul 30 05:27:38 2024

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