Chlorine in PDB 7wx6: A Legionella Acetyltransferase Vipf

Protein crystallography data

The structure of A Legionella Acetyltransferase Vipf, PDB code: 7wx6 was solved by T.T.Chen, Y.L.Lin, Z.Chen, A.D.Han, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.77 / 2.27
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 72.047, 84.525, 105.547, 90, 90, 90
R / Rfree (%) 22.1 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Legionella Acetyltransferase Vipf (pdb code 7wx6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the A Legionella Acetyltransferase Vipf, PDB code: 7wx6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7wx6

Go back to Chlorine Binding Sites List in 7wx6
Chlorine binding site 1 out of 2 in the A Legionella Acetyltransferase Vipf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Legionella Acetyltransferase Vipf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:78.3
occ:1.00
CL1 A:CLM303 0.0 78.3 1.0
C1 A:CLM303 1.8 73.2 1.0
C2 A:CLM303 2.8 58.0 1.0
CL2 A:CLM303 3.0 78.5 1.0
N2 A:CLM303 3.0 55.9 1.0
OE2 A:GLU129 3.2 38.2 1.0
OE2 A:GLU253 3.6 37.3 1.0
O2 A:CLM303 3.8 50.7 1.0
CD A:GLU129 4.1 38.8 1.0
C3 A:CLM303 4.4 58.8 1.0
CD A:GLU253 4.5 40.4 1.0
OE1 A:GLU129 4.5 40.7 1.0
O4 A:CLM303 4.6 55.3 1.0
C4 A:CLM303 4.8 59.7 1.0

Chlorine binding site 2 out of 2 in 7wx6

Go back to Chlorine Binding Sites List in 7wx6
Chlorine binding site 2 out of 2 in the A Legionella Acetyltransferase Vipf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of A Legionella Acetyltransferase Vipf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:78.5
occ:1.00
CL2 A:CLM303 0.0 78.5 1.0
C1 A:CLM303 1.8 73.2 1.0
C2 A:CLM303 2.8 58.0 1.0
O2 A:CLM303 2.9 50.7 1.0
CL1 A:CLM303 3.0 78.3 1.0
OE1 A:GLU129 3.1 40.7 1.0
OE2 A:GLU253 3.3 37.3 1.0
CD A:GLU129 3.5 38.8 1.0
CD A:GLU253 3.5 40.4 1.0
OE2 A:GLU129 3.6 38.2 1.0
OH A:TYR276 3.6 36.7 1.0
OE1 A:GLU253 3.7 46.3 1.0
N2 A:CLM303 4.1 55.9 1.0
CZ A:TYR276 4.3 32.5 1.0
CG A:GLU253 4.4 38.5 1.0
CE1 A:TYR276 4.6 30.9 1.0
CG A:GLU129 4.7 22.5 1.0
CB A:GLU129 4.9 16.4 1.0

Reference:

T.T.Chen, Y.Lin, S.Zhang, A.Han. Structural Basis For the Acetylation Mechanism of the Legionella Effector Vipf. Acta Crystallogr D Struct V. 78 1110 2022BIOL.
ISSN: ISSN 2059-7983
PubMed: 36048151
DOI: 10.1107/S2059798322007318
Page generated: Tue Apr 4 22:16:00 2023

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