Chlorine in PDB 7wxm: Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form

Enzymatic activity of Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form

All present enzymatic activity of Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form:
4.2.2.3;

Protein crystallography data

The structure of Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form, PDB code: 7wxm was solved by P.Dash, R.Acharya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.09 / 1.23
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.106, 84.624, 91.372, 90, 90, 90
R / Rfree (%) 17 / 18.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form (pdb code 7wxm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form, PDB code: 7wxm:

Chlorine binding site 1 out of 1 in 7wxm

Go back to Chlorine Binding Sites List in 7wxm
Chlorine binding site 1 out of 1 in the Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Pl-5 Family Polysaccharide Lyase Panpl From Pandoraea Apista at PH6.5 in Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:14.0
occ:0.77
 NE A:ARG38 3.1 13.6 1.0
O A:HOH670 3.4 20.2 1.0
NH2 A:ARG108 3.4 23.9 1.0
NH1 A:ARG108 3.6 36.1 1.0
CD A:ARG38 3.8 13.4 1.0
CZ A:ARG108 3.9 28.2 1.0
CB A:ALA110 3.9 14.1 1.0
CZ A:ARG38 4.0 13.8 1.0
NH2 A:ARG38 4.1 14.2 1.0
CG A:ARG38 4.3 13.3 1.0
CG2 A:VAL112 4.7 13.7 1.0

Reference:

P.Dash, R.Acharya. Distinct Modes of Hidden Structural Dynamics in the Functioning of An Allosteric Polysaccharide Lyase. Acs Cent.Sci. V. 8 933 2022.
ISSN: ESSN 2374-7951
PubMed: 35912344
DOI: 10.1021/ACSCENTSCI.2C00277
Page generated: Tue Jul 30 05:43:01 2024

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